==26210== Memcheck, a memory error detector ==26210== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26210== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26210== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==26210== Parent PID: 24098 ==26210== ==26210== ==26210== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26210== Open file descriptor 12: ==26210== at 0xF81F0FD: pipe (pipe.c:29) ==26210== by 0x196DC07D: ??? ==26210== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26210== by 0x10118418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26210== by 0x100B1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26210== by 0x102A1D38: PetscInitialize (pinit.c:924) ==26210== by 0xF11FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26210== by 0xF11FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26210== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26210== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26210== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26210== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26210== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26210== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==26210== ==26210== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26210== at 0xF823A9C: __open_nocancel (open64_nocancel.c:39) ==26210== by 0xF7A7BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26210== by 0xF15C822: ??? ==26210== by 0xF15C96F: ??? ==26210== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26210== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26210== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26210== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26210== by 0x10118418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26210== by 0x100B1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26210== by 0x102A1D38: PetscInitialize (pinit.c:924) ==26210== by 0xF11FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26210== by 0xF11FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26210== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26210== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26210== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26210== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26210== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26210== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==26210== ==26210== Open file descriptor 145: ==26210== ==26210== ==26210== Open file descriptor 142: ==26210== ==26210== ==26210== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==26210== ==26210== ==26210== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26210== ==26210== ==26210== ==26210== HEAP SUMMARY: ==26210== in use at exit: 35,199 bytes in 290 blocks ==26210== total heap usage: 1,108,325 allocs, 1,108,035 frees, 84,841,874 bytes allocated ==26210== ==26210== LEAK SUMMARY: ==26210== definitely lost: 0 bytes in 0 blocks ==26210== indirectly lost: 0 bytes in 0 blocks ==26210== possibly lost: 0 bytes in 0 blocks ==26210== still reachable: 56 bytes in 3 blocks ==26210== suppressed: 35,143 bytes in 287 blocks ==26210== Reachable blocks (those to which a pointer was found) are not shown. ==26210== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26210== ==26210== For lists of detected and suppressed errors, rerun with: -s ==26210== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)