==26139== Memcheck, a memory error detector ==26139== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26139== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26139== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithParticles -malloc_debug -malloc_dump -memory_info ==26139== Parent PID: 24140 ==26139== ==26139== ==26139== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26139== Open file descriptor 12: ==26139== at 0xF94A0FD: pipe (pipe.c:29) ==26139== by 0x196DC07D: ??? ==26139== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26139== by 0x10243418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26139== by 0x101DCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26139== by 0x10388D38: PetscInitialize (pinit.c:924) ==26139== by 0xF11FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26139== by 0xF11FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26139== by 0x2E1B32: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26139== by 0x2D8459: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26139== by 0x2DCE24: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26139== by 0x2DCCC4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26139== by 0x2DD35B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26139== by 0x2D6875: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==26139== ==26139== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26139== at 0xF94EA9C: __open_nocancel (open64_nocancel.c:39) ==26139== by 0xF8D2BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26139== by 0xF15C822: ??? ==26139== by 0xF15C96F: ??? ==26139== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26139== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26139== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26139== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26139== by 0x10243418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26139== by 0x101DCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26139== by 0x10388D38: PetscInitialize (pinit.c:924) ==26139== by 0xF11FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26139== by 0xF11FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26139== by 0x2E1B32: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26139== by 0x2D8459: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26139== by 0x2DCE24: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26139== by 0x2DCCC4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26139== by 0x2DD35B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26139== by 0x2D6875: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==26139== ==26139== Open file descriptor 145: ==26139== ==26139== ==26139== Open file descriptor 142: ==26139== ==26139== ==26139== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithParticles_valgrind.txt ==26139== ==26139== ==26139== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26139== ==26139== ==26139== ==26139== HEAP SUMMARY: ==26139== in use at exit: 35,199 bytes in 290 blocks ==26139== total heap usage: 95,696 allocs, 95,406 frees, 15,546,530 bytes allocated ==26139== ==26139== LEAK SUMMARY: ==26139== definitely lost: 0 bytes in 0 blocks ==26139== indirectly lost: 0 bytes in 0 blocks ==26139== possibly lost: 0 bytes in 0 blocks ==26139== still reachable: 56 bytes in 3 blocks ==26139== suppressed: 35,143 bytes in 287 blocks ==26139== Reachable blocks (those to which a pointer was found) are not shown. ==26139== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26139== ==26139== For lists of detected and suppressed errors, rerun with: -s ==26139== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)