==40668== Memcheck, a memory error detector ==40668== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40668== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40668== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestFibreReaderAbilityExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==40668== Parent PID: 23869 ==40668== ==40668== ==40668== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40668== Open file descriptor 12: ==40668== at 0xA8160FD: pipe (pipe.c:29) ==40668== by 0x1436507D: ??? ==40668== by 0xD5F64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40668== by 0xABE2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40668== by 0xAB7BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40668== by 0xB0BFD38: PetscInitialize (pinit.c:924) ==40668== by 0xA0FAE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40668== by 0xA0FAEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40668== by 0x128E4C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40668== by 0x123553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40668== by 0x126214: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40668== by 0x12610F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40668== by 0x126723: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40668== by 0x121D55: main (TestFibreReaderAbilityExtendedBidomainProblem.cpp:18) ==40668== ==40668== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40668== at 0xA81AA9C: __open_nocancel (open64_nocancel.c:39) ==40668== by 0xA79EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40668== by 0xA137822: ??? ==40668== by 0xA13796F: ??? ==40668== by 0xD69B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40668== by 0xD69B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40668== by 0xD651922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40668== by 0xD5F62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40668== by 0xABE2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40668== by 0xAB7BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40668== by 0xB0BFD38: PetscInitialize (pinit.c:924) ==40668== by 0xA0FAE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40668== by 0xA0FAEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40668== by 0x128E4C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40668== by 0x123553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40668== by 0x126214: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40668== by 0x12610F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40668== by 0x126723: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40668== by 0x121D55: main (TestFibreReaderAbilityExtendedBidomainProblem.cpp:18) ==40668== ==40668== Open file descriptor 145: ==40668== ==40668== ==40668== Open file descriptor 142: ==40668== ==40668== ==40668== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestFibreReaderAbilityExtendedBidomainProblem_valgrind.txt ==40668== ==40668== ==40668== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40668== ==40668== ==40668== ==40668== HEAP SUMMARY: ==40668== in use at exit: 17,018 bytes in 72 blocks ==40668== total heap usage: 99,194 allocs, 99,122 frees, 10,789,352 bytes allocated ==40668== ==40668== LEAK SUMMARY: ==40668== definitely lost: 0 bytes in 0 blocks ==40668== indirectly lost: 0 bytes in 0 blocks ==40668== possibly lost: 0 bytes in 0 blocks ==40668== still reachable: 24 bytes in 2 blocks ==40668== suppressed: 16,994 bytes in 70 blocks ==40668== Reachable blocks (those to which a pointer was found) are not shown. ==40668== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40668== ==40668== For lists of detected and suppressed errors, rerun with: -s ==40668== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)