==40584== Memcheck, a memory error detector ==40584== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40584== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40584== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestVentilationProblem -malloc_debug -malloc_dump -memory_info ==40584== Parent PID: 23869 ==40584== ==40584== ==40584== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40584== Open file descriptor 12: ==40584== at 0x6E760FD: pipe (pipe.c:29) ==40584== by 0x107CB07D: ??? ==40584== by 0x982C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40584== by 0x7073418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40584== by 0x700CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40584== by 0x71B8D38: PetscInitialize (pinit.c:924) ==40584== by 0x668FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40584== by 0x668FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40584== by 0x11769E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40584== by 0x1128D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40584== by 0x115638: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40584== by 0x1154D8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40584== by 0x115B6F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40584== by 0x110B55: main (TestVentilationProblem.cpp:19) ==40584== ==40584== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40584== at 0x6E7AA9C: __open_nocancel (open64_nocancel.c:39) ==40584== by 0x6DFEBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40584== by 0x66CC822: ??? ==40584== by 0x66CC96F: ??? ==40584== by 0x98D16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40584== by 0x98D1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40584== by 0x9887922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40584== by 0x982C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40584== by 0x7073418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40584== by 0x700CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40584== by 0x71B8D38: PetscInitialize (pinit.c:924) ==40584== by 0x668FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40584== by 0x668FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40584== by 0x11769E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40584== by 0x1128D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40584== by 0x115638: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40584== by 0x1154D8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40584== by 0x115B6F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40584== by 0x110B55: main (TestVentilationProblem.cpp:19) ==40584== ==40584== Open file descriptor 145: ==40584== ==40584== ==40584== Open file descriptor 142: ==40584== ==40584== ==40584== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVentilationProblem_valgrind.txt ==40584== ==40584== ==40584== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40584== ==40584== ==40584== ==40584== HEAP SUMMARY: ==40584== in use at exit: 16,929 bytes in 68 blocks ==40584== total heap usage: 5,789,957 allocs, 5,789,889 frees, 493,790,430 bytes allocated ==40584== ==40584== LEAK SUMMARY: ==40584== definitely lost: 0 bytes in 0 blocks ==40584== indirectly lost: 0 bytes in 0 blocks ==40584== possibly lost: 0 bytes in 0 blocks ==40584== still reachable: 24 bytes in 2 blocks ==40584== suppressed: 16,905 bytes in 66 blocks ==40584== Reachable blocks (those to which a pointer was found) are not shown. ==40584== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40584== ==40584== For lists of detected and suppressed errors, rerun with: -s ==40584== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)