==25358== Memcheck, a memory error detector ==25358== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25358== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25358== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestToroidalHoneycombMeshGenerator -malloc_debug -malloc_dump -memory_info ==25358== Parent PID: 24808 ==25358== ==25358== ==25358== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25358== Open file descriptor 12: ==25358== at 0x81280FD: pipe (pipe.c:29) ==25358== by 0x100EC07D: ??? ==25358== by 0xBA704CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25358== by 0x7D77418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25358== by 0x7D10D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25358== by 0x6A07D38: PetscInitialize (pinit.c:924) ==25358== by 0x6571E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25358== by 0x6571EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25358== by 0x11717D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25358== by 0x1125CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25358== by 0x114F48: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25358== by 0x114DE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25358== by 0x11547F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25358== by 0x1109F5: main (TestToroidalHoneycombMeshGenerator.cpp:19) ==25358== ==25358== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25358== at 0x812CA9C: __open_nocancel (open64_nocancel.c:39) ==25358== by 0x80B0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25358== by 0x65AE822: ??? ==25358== by 0x65AE96F: ??? ==25358== by 0xBB156DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25358== by 0xBB15938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25358== by 0xBACB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25358== by 0xBA702DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25358== by 0x7D77418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25358== by 0x7D10D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25358== by 0x6A07D38: PetscInitialize (pinit.c:924) ==25358== by 0x6571E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25358== by 0x6571EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25358== by 0x11717D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25358== by 0x1125CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25358== by 0x114F48: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25358== by 0x114DE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25358== by 0x11547F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25358== by 0x1109F5: main (TestToroidalHoneycombMeshGenerator.cpp:19) ==25358== ==25358== Open file descriptor 145: ==25358== ==25358== ==25358== Open file descriptor 142: ==25358== ==25358== ==25358== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestToroidalHoneycombMeshGenerator_valgrind.txt ==25358== ==25358== ==25358== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25358== ==25358== ==25358== ==25358== HEAP SUMMARY: ==25358== in use at exit: 35,071 bytes in 289 blocks ==25358== total heap usage: 89,434 allocs, 89,145 frees, 11,819,611 bytes allocated ==25358== ==25358== LEAK SUMMARY: ==25358== definitely lost: 0 bytes in 0 blocks ==25358== indirectly lost: 0 bytes in 0 blocks ==25358== possibly lost: 0 bytes in 0 blocks ==25358== still reachable: 24 bytes in 2 blocks ==25358== suppressed: 35,047 bytes in 287 blocks ==25358== Reachable blocks (those to which a pointer was found) are not shown. ==25358== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25358== ==25358== For lists of detected and suppressed errors, rerun with: -s ==25358== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)