==41764== Memcheck, a memory error detector ==41764== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41764== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41764== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainDistributedMesh -malloc_debug -malloc_dump -memory_info ==41764== Parent PID: 24085 ==41764== ==41764== ==41764== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41764== Open file descriptor 12: ==41764== at 0xBC3C0FD: pipe (pipe.c:29) ==41764== by 0x1436407D: ??? ==41764== by 0xFB1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41764== by 0xB544418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41764== by 0xB4DDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41764== by 0x8205D38: PetscInitialize (pinit.c:924) ==41764== by 0xB3E9E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41764== by 0xB3E9EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41764== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41764== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41764== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41764== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41764== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41764== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==41764== ==41764== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41764== at 0xBC40A9C: __open_nocancel (open64_nocancel.c:39) ==41764== by 0xBBC4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41764== by 0xB426822: ??? ==41764== by 0xB42696F: ??? ==41764== by 0xFBC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41764== by 0xFBC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41764== by 0xFB79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41764== by 0xFB1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41764== by 0xB544418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41764== by 0xB4DDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41764== by 0x8205D38: PetscInitialize (pinit.c:924) ==41764== by 0xB3E9E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41764== by 0xB3E9EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41764== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41764== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41764== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41764== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41764== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41764== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==41764== ==41764== Open file descriptor 145: ==41764== ==41764== ==41764== Open file descriptor 142: ==41764== ==41764== ==41764== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainDistributedMesh_valgrind.txt ==41764== ==41764== ==41764== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41764== ==41764== ==41764== ==41764== HEAP SUMMARY: ==41764== in use at exit: 35,663 bytes in 299 blocks ==41764== total heap usage: 412,065 allocs, 411,766 frees, 106,308,225 bytes allocated ==41764== ==41764== LEAK SUMMARY: ==41764== definitely lost: 0 bytes in 0 blocks ==41764== indirectly lost: 0 bytes in 0 blocks ==41764== possibly lost: 0 bytes in 0 blocks ==41764== still reachable: 24 bytes in 2 blocks ==41764== suppressed: 35,639 bytes in 297 blocks ==41764== Reachable blocks (those to which a pointer was found) are not shown. ==41764== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41764== ==41764== For lists of detected and suppressed errors, rerun with: -s ==41764== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 52 from 35)