==44121== Memcheck, a memory error detector ==44121== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==44121== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==44121== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHdf5ToVisualizerConverters -malloc_debug -malloc_dump -memory_info ==44121== Parent PID: 24085 ==44121== ==44121== ==44121== FILE DESCRIPTORS: 9 open (3 std) at exit. ==44121== Open file descriptor 12: ==44121== at 0xA8E10FD: pipe (pipe.c:29) ==44121== by 0x1436407D: ??? ==44121== by 0xD99D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==44121== by 0xACAD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44121== by 0xAC46D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44121== by 0xB18AD38: PetscInitialize (pinit.c:924) ==44121== by 0xA1C5E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==44121== by 0xA1C5EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==44121== by 0x1241F8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==44121== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==44121== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==44121== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==44121== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==44121== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==44121== ==44121== Open file descriptor 8: /dev/shm/open_mpi.0000 ==44121== at 0xA8E5A9C: __open_nocancel (open64_nocancel.c:39) ==44121== by 0xA869BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==44121== by 0xA202822: ??? ==44121== by 0xA20296F: ??? ==44121== by 0xDA426DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==44121== by 0xDA42938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==44121== by 0xD9F8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==44121== by 0xD99D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==44121== by 0xACAD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44121== by 0xAC46D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44121== by 0xB18AD38: PetscInitialize (pinit.c:924) ==44121== by 0xA1C5E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==44121== by 0xA1C5EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==44121== by 0x1241F8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==44121== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==44121== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==44121== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==44121== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==44121== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==44121== ==44121== Open file descriptor 145: ==44121== ==44121== ==44121== Open file descriptor 142: ==44121== ==44121== ==44121== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5ToVisualizerConverters_valgrind.txt ==44121== ==44121== ==44121== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==44121== ==44121== ==44121== ==44121== HEAP SUMMARY: ==44121== in use at exit: 35,183 bytes in 289 blocks ==44121== total heap usage: 104,084 allocs, 103,795 frees, 35,112,355 bytes allocated ==44121== ==44121== LEAK SUMMARY: ==44121== definitely lost: 0 bytes in 0 blocks ==44121== indirectly lost: 0 bytes in 0 blocks ==44121== possibly lost: 0 bytes in 0 blocks ==44121== still reachable: 24 bytes in 2 blocks ==44121== suppressed: 35,159 bytes in 287 blocks ==44121== Reachable blocks (those to which a pointer was found) are not shown. ==44121== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==44121== ==44121== For lists of detected and suppressed errors, rerun with: -s ==44121== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)