==25991== Memcheck, a memory error detector ==25991== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25991== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25991== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellCycleModelOdeSolver -malloc_debug -malloc_dump -memory_info ==25991== Parent PID: 24549 ==25991== ==25991== ==25991== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25991== Open file descriptor 12: ==25991== at 0xF8EF0FD: pipe (pipe.c:29) ==25991== by 0x1A50107D: ??? ==25991== by 0x1469C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25991== by 0xF53C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25991== by 0xF4D5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25991== by 0xE1CCD38: PetscInitialize (pinit.c:924) ==25991== by 0xE03BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25991== by 0xE03BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25991== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25991== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25991== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25991== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25991== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25991== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==25991== ==25991== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25991== at 0xF8F3A9C: __open_nocancel (open64_nocancel.c:39) ==25991== by 0xF877BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25991== by 0xE078822: ??? ==25991== by 0xE07896F: ??? ==25991== by 0x147416DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25991== by 0x14741938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25991== by 0x146F7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25991== by 0x1469C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25991== by 0xF53C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25991== by 0xF4D5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25991== by 0xE1CCD38: PetscInitialize (pinit.c:924) ==25991== by 0xE03BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25991== by 0xE03BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25991== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25991== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25991== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25991== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25991== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25991== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==25991== ==25991== Open file descriptor 145: ==25991== ==25991== ==25991== Open file descriptor 142: ==25991== ==25991== ==25991== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellCycleModelOdeSolver_valgrind.txt ==25991== ==25991== ==25991== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25991== ==25991== ==25991== ==25991== HEAP SUMMARY: ==25991== in use at exit: 35,199 bytes in 290 blocks ==25991== total heap usage: 531,573 allocs, 531,283 frees, 13,709,209 bytes allocated ==25991== ==25991== LEAK SUMMARY: ==25991== definitely lost: 0 bytes in 0 blocks ==25991== indirectly lost: 0 bytes in 0 blocks ==25991== possibly lost: 0 bytes in 0 blocks ==25991== still reachable: 56 bytes in 3 blocks ==25991== suppressed: 35,143 bytes in 287 blocks ==25991== Reachable blocks (those to which a pointer was found) are not shown. ==25991== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25991== ==25991== For lists of detected and suppressed errors, rerun with: -s ==25991== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)