==26748== Memcheck, a memory error detector ==26748== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26748== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26748== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSemBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26748== Parent PID: 24549 ==26748== ==26748== ==26748== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26748== Open file descriptor 12: ==26748== at 0x117E10FD: pipe (pipe.c:29) ==26748== by 0x1A50107D: ??? ==26748== by 0x156B94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26748== by 0x11347418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26748== by 0x112E0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26748== by 0xFFD7D38: PetscInitialize (pinit.c:924) ==26748== by 0xFB43E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26748== by 0xFB43EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26748== by 0x12F05D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26748== by 0x129D4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26748== by 0x12C882: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26748== by 0x12C722: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26748== by 0x12CDB9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26748== by 0x128175: main (TestSemBasedCellPopulation.cpp:19) ==26748== ==26748== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26748== at 0x117E5A9C: __open_nocancel (open64_nocancel.c:39) ==26748== by 0x11769BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26748== by 0xFB80822: ??? ==26748== by 0xFB8096F: ??? ==26748== by 0x1575E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26748== by 0x1575E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26748== by 0x15714922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26748== by 0x156B92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26748== by 0x11347418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26748== by 0x112E0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26748== by 0xFFD7D38: PetscInitialize (pinit.c:924) ==26748== by 0xFB43E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26748== by 0xFB43EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26748== by 0x12F05D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26748== by 0x129D4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26748== by 0x12C882: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26748== by 0x12C722: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26748== by 0x12CDB9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26748== by 0x128175: main (TestSemBasedCellPopulation.cpp:19) ==26748== ==26748== Open file descriptor 145: ==26748== ==26748== ==26748== Open file descriptor 142: ==26748== ==26748== ==26748== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSemBasedCellPopulation_valgrind.txt ==26748== ==26748== ==26748== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26748== ==26748== ==26748== ==26748== HEAP SUMMARY: ==26748== in use at exit: 35,263 bytes in 291 blocks ==26748== total heap usage: 38,387 allocs, 38,096 frees, 7,938,942 bytes allocated ==26748== ==26748== LEAK SUMMARY: ==26748== definitely lost: 0 bytes in 0 blocks ==26748== indirectly lost: 0 bytes in 0 blocks ==26748== possibly lost: 0 bytes in 0 blocks ==26748== still reachable: 120 bytes in 4 blocks ==26748== suppressed: 35,143 bytes in 287 blocks ==26748== Reachable blocks (those to which a pointer was found) are not shown. ==26748== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26748== ==26748== For lists of detected and suppressed errors, rerun with: -s ==26748== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)