==41662== Memcheck, a memory error detector ==41662== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41662== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41662== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedVsBidomainProblem -malloc_debug -malloc_dump -memory_info ==41662== Parent PID: 24505 ==41662== ==41662== ==41662== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41662== Open file descriptor 12: ==41662== at 0xAD080FD: pipe (pipe.c:29) ==41662== by 0x1444707D: ??? ==41662== by 0xDA8B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41662== by 0xB0D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41662== by 0xB06FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41662== by 0xB5B1D38: PetscInitialize (pinit.c:924) ==41662== by 0xA5ECE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41662== by 0xA5ECEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41662== by 0x12E254: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41662== by 0x128EAD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41662== by 0x12C1D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41662== by 0x12C076: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41662== by 0x12C70D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41662== by 0x1272D5: main (TestExtendedVsBidomainProblem.cpp:19) ==41662== ==41662== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41662== at 0xAD0CA9C: __open_nocancel (open64_nocancel.c:39) ==41662== by 0xAC90BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41662== by 0xA629822: ??? ==41662== by 0xA62996F: ??? ==41662== by 0xDB306DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41662== by 0xDB30938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41662== by 0xDAE6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41662== by 0xDA8B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41662== by 0xB0D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41662== by 0xB06FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41662== by 0xB5B1D38: PetscInitialize (pinit.c:924) ==41662== by 0xA5ECE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41662== by 0xA5ECEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41662== by 0x12E254: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41662== by 0x128EAD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41662== by 0x12C1D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41662== by 0x12C076: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41662== by 0x12C70D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41662== by 0x1272D5: main (TestExtendedVsBidomainProblem.cpp:19) ==41662== ==41662== Open file descriptor 145: ==41662== ==41662== ==41662== Open file descriptor 142: ==41662== ==41662== ==41662== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedVsBidomainProblem_valgrind.txt ==41662== ==41662== ==41662== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41662== ==41662== ==41662== ==41662== HEAP SUMMARY: ==41662== in use at exit: 35,663 bytes in 299 blocks ==41662== total heap usage: 449,895 allocs, 449,596 frees, 115,095,305 bytes allocated ==41662== ==41662== LEAK SUMMARY: ==41662== definitely lost: 0 bytes in 0 blocks ==41662== indirectly lost: 0 bytes in 0 blocks ==41662== possibly lost: 0 bytes in 0 blocks ==41662== still reachable: 24 bytes in 2 blocks ==41662== suppressed: 35,639 bytes in 297 blocks ==41662== Reachable blocks (those to which a pointer was found) are not shown. ==41662== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41662== ==41662== For lists of detected and suppressed errors, rerun with: -s ==41662== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 61 from 35)