==26301== Memcheck, a memory error detector ==26301== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26301== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26301== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestGoldbeter1991OdeSystem -malloc_debug -malloc_dump -memory_info ==26301== Parent PID: 24505 ==26301== ==26301== ==26301== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26301== Open file descriptor 12: ==26301== at 0xF8EF0FD: pipe (pipe.c:29) ==26301== by 0x1A50107D: ??? ==26301== by 0x1469C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26301== by 0xF53C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26301== by 0xF4D5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26301== by 0xE1CCD38: PetscInitialize (pinit.c:924) ==26301== by 0xE03BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26301== by 0xE03BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26301== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26301== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26301== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26301== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26301== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26301== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==26301== ==26301== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26301== at 0xF8F3A9C: __open_nocancel (open64_nocancel.c:39) ==26301== by 0xF877BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26301== by 0xE078822: ??? ==26301== by 0xE07896F: ??? ==26301== by 0x147416DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26301== by 0x14741938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26301== by 0x146F7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26301== by 0x1469C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26301== by 0xF53C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26301== by 0xF4D5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26301== by 0xE1CCD38: PetscInitialize (pinit.c:924) ==26301== by 0xE03BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26301== by 0xE03BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26301== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26301== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26301== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26301== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26301== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26301== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==26301== ==26301== Open file descriptor 145: ==26301== ==26301== ==26301== Open file descriptor 142: ==26301== ==26301== ==26301== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGoldbeter1991OdeSystem_valgrind.txt ==26301== ==26301== ==26301== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26301== ==26301== ==26301== ==26301== HEAP SUMMARY: ==26301== in use at exit: 35,167 bytes in 289 blocks ==26301== total heap usage: 47,391 allocs, 47,102 frees, 8,910,094 bytes allocated ==26301== ==26301== LEAK SUMMARY: ==26301== definitely lost: 0 bytes in 0 blocks ==26301== indirectly lost: 0 bytes in 0 blocks ==26301== possibly lost: 0 bytes in 0 blocks ==26301== still reachable: 24 bytes in 2 blocks ==26301== suppressed: 35,143 bytes in 287 blocks ==26301== Reachable blocks (those to which a pointer was found) are not shown. ==26301== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26301== ==26301== For lists of detected and suppressed errors, rerun with: -s ==26301== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)