==26574== Memcheck, a memory error detector ==26574== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26574== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26574== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26574== Parent PID: 24505 ==26574== ==26574== ==26574== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26574== Open file descriptor 12: ==26574== at 0x118230FD: pipe (pipe.c:29) ==26574== by 0x1A50107D: ??? ==26574== by 0x156B94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26574== by 0x11389418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26574== by 0x11322D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26574== by 0x10019D38: PetscInitialize (pinit.c:924) ==26574== by 0xFB43E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26574== by 0xFB43EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26574== by 0x16AA6B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26574== by 0x162E89: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26574== by 0x1661D0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26574== by 0x166070: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26574== by 0x166707: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26574== by 0x1612A5: main (TestPottsBasedCellPopulation.cpp:19) ==26574== ==26574== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26574== at 0x11827A9C: __open_nocancel (open64_nocancel.c:39) ==26574== by 0x117ABBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26574== by 0xFB80822: ??? ==26574== by 0xFB8096F: ??? ==26574== by 0x1575E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26574== by 0x1575E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26574== by 0x15714922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26574== by 0x156B92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26574== by 0x11389418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26574== by 0x11322D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26574== by 0x10019D38: PetscInitialize (pinit.c:924) ==26574== by 0xFB43E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26574== by 0xFB43EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26574== by 0x16AA6B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26574== by 0x162E89: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26574== by 0x1661D0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26574== by 0x166070: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26574== by 0x166707: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26574== by 0x1612A5: main (TestPottsBasedCellPopulation.cpp:19) ==26574== ==26574== Open file descriptor 145: ==26574== ==26574== ==26574== Open file descriptor 142: ==26574== ==26574== ==26574== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsBasedCellPopulation_valgrind.txt ==26574== ==26574== ==26574== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26574== ==26574== ==26574== ==26574== HEAP SUMMARY: ==26574== in use at exit: 35,199 bytes in 290 blocks ==26574== total heap usage: 59,126 allocs, 58,836 frees, 12,932,035 bytes allocated ==26574== ==26574== LEAK SUMMARY: ==26574== definitely lost: 0 bytes in 0 blocks ==26574== indirectly lost: 0 bytes in 0 blocks ==26574== possibly lost: 0 bytes in 0 blocks ==26574== still reachable: 56 bytes in 3 blocks ==26574== suppressed: 35,143 bytes in 287 blocks ==26574== Reachable blocks (those to which a pointer was found) are not shown. ==26574== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26574== ==26574== For lists of detected and suppressed errors, rerun with: -s ==26574== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)