==42398== Memcheck, a memory error detector ==42398== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42398== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42398== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainProblem -malloc_debug -malloc_dump -memory_info ==42398== Parent PID: 24524 ==42398== ==42398== ==42398== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42398== Open file descriptor 12: ==42398== at 0xC2010FD: pipe (pipe.c:29) ==42398== by 0x1444607D: ??? ==42398== by 0xFC8B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42398== by 0xBB09418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42398== by 0xBAA2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42398== by 0x826CD38: PetscInitialize (pinit.c:924) ==42398== by 0xB9D1E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42398== by 0xB9D1EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42398== by 0x140858: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42398== by 0x13A03D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42398== by 0x13D718: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42398== by 0x13D5B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42398== by 0x13DC4F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42398== by 0x1382C5: main (TestBidomainProblem.cpp:19) ==42398== ==42398== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42398== at 0xC205A9C: __open_nocancel (open64_nocancel.c:39) ==42398== by 0xC189BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42398== by 0x8116822: ??? ==42398== by 0x811696F: ??? ==42398== by 0xFD306DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42398== by 0xFD30938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42398== by 0xFCE6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42398== by 0xFC8B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42398== by 0xBB09418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42398== by 0xBAA2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42398== by 0x826CD38: PetscInitialize (pinit.c:924) ==42398== by 0xB9D1E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42398== by 0xB9D1EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42398== by 0x140858: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42398== by 0x13A03D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42398== by 0x13D718: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42398== by 0x13D5B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42398== by 0x13DC4F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42398== by 0x1382C5: main (TestBidomainProblem.cpp:19) ==42398== ==42398== Open file descriptor 145: ==42398== ==42398== ==42398== Open file descriptor 142: ==42398== ==42398== ==42398== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainProblem_valgrind.txt ==42398== ==42398== ==42398== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42398== ==42398== ==42398== ==42398== HEAP SUMMARY: ==42398== in use at exit: 35,663 bytes in 299 blocks ==42398== total heap usage: 568,770 allocs, 568,471 frees, 217,901,184 bytes allocated ==42398== ==42398== LEAK SUMMARY: ==42398== definitely lost: 0 bytes in 0 blocks ==42398== indirectly lost: 0 bytes in 0 blocks ==42398== possibly lost: 0 bytes in 0 blocks ==42398== still reachable: 24 bytes in 2 blocks ==42398== suppressed: 35,639 bytes in 297 blocks ==42398== Reachable blocks (those to which a pointer was found) are not shown. ==42398== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42398== ==42398== For lists of detected and suppressed errors, rerun with: -s ==42398== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 100 from 35)