==26603== Memcheck, a memory error detector ==26603== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26603== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26603== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellsGenerator -malloc_debug -malloc_dump -memory_info ==26603== Parent PID: 24524 ==26603== ==26603== ==26603== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26603== Open file descriptor 12: ==26603== at 0x102430FD: pipe (pipe.c:29) ==26603== by 0x1A50107D: ??? ==26603== by 0x135504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26603== by 0x10B3C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26603== by 0x10AD5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26603== by 0x10CC5D38: PetscInitialize (pinit.c:924) ==26603== by 0xFB43E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26603== by 0xFB43EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26603== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26603== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26603== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26603== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26603== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26603== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==26603== ==26603== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26603== at 0x10247A9C: __open_nocancel (open64_nocancel.c:39) ==26603== by 0x101CBBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26603== by 0xFB80822: ??? ==26603== by 0xFB8096F: ??? ==26603== by 0x135F56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26603== by 0x135F5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26603== by 0x135AB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26603== by 0x135502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26603== by 0x10B3C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26603== by 0x10AD5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26603== by 0x10CC5D38: PetscInitialize (pinit.c:924) ==26603== by 0xFB43E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26603== by 0xFB43EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26603== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26603== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26603== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26603== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26603== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26603== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==26603== ==26603== Open file descriptor 145: ==26603== ==26603== ==26603== Open file descriptor 142: ==26603== ==26603== ==26603== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellsGenerator_valgrind.txt ==26603== ==26603== ==26603== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26603== ==26603== ==26603== ==26603== HEAP SUMMARY: ==26603== in use at exit: 35,263 bytes in 291 blocks ==26603== total heap usage: 53,588 allocs, 53,297 frees, 9,647,725 bytes allocated ==26603== ==26603== LEAK SUMMARY: ==26603== definitely lost: 0 bytes in 0 blocks ==26603== indirectly lost: 0 bytes in 0 blocks ==26603== possibly lost: 0 bytes in 0 blocks ==26603== still reachable: 120 bytes in 4 blocks ==26603== suppressed: 35,143 bytes in 287 blocks ==26603== Reachable blocks (those to which a pointer was found) are not shown. ==26603== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26603== ==26603== For lists of detected and suppressed errors, rerun with: -s ==26603== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)