==42493== Memcheck, a memory error detector ==42493== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42493== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42493== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==42493== Parent PID: 24524 ==42493== ==42493== ==42493== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42493== Open file descriptor 12: ==42493== at 0xAAA20FD: pipe (pipe.c:29) ==42493== by 0x1444707D: ??? ==42493== by 0xDA404CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42493== by 0xA3AA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42493== by 0xA343D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42493== by 0xB214D38: PetscInitialize (pinit.c:924) ==42493== by 0xA24FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42493== by 0xA24FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42493== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42493== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42493== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42493== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42493== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42493== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==42493== ==42493== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42493== at 0xAAA6A9C: __open_nocancel (open64_nocancel.c:39) ==42493== by 0xAA2ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42493== by 0xA28C822: ??? ==42493== by 0xA28C96F: ??? ==42493== by 0xDAE56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42493== by 0xDAE5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42493== by 0xDA9B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42493== by 0xDA402DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42493== by 0xA3AA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42493== by 0xA343D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42493== by 0xB214D38: PetscInitialize (pinit.c:924) ==42493== by 0xA24FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42493== by 0xA24FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42493== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42493== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42493== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42493== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42493== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42493== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==42493== ==42493== Open file descriptor 145: ==42493== ==42493== ==42493== Open file descriptor 142: ==42493== ==42493== ==42493== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainProblem_valgrind.txt ==42493== ==42493== ==42493== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42493== ==42493== ==42493== ==42493== HEAP SUMMARY: ==42493== in use at exit: 35,590 bytes in 295 blocks ==42493== total heap usage: 2,356,766 allocs, 2,356,471 frees, 1,137,203,509 bytes allocated ==42493== ==42493== LEAK SUMMARY: ==42493== definitely lost: 0 bytes in 0 blocks ==42493== indirectly lost: 0 bytes in 0 blocks ==42493== possibly lost: 0 bytes in 0 blocks ==42493== still reachable: 24 bytes in 2 blocks ==42493== suppressed: 35,566 bytes in 293 blocks ==42493== Reachable blocks (those to which a pointer was found) are not shown. ==42493== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42493== ==42493== For lists of detected and suppressed errors, rerun with: -s ==42493== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 31)