==43071== Memcheck, a memory error detector ==43071== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43071== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43071== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestGeneralizedRushLarsen -malloc_debug -malloc_dump -memory_info ==43071== Parent PID: 24524 ==43071== ==43071== ==43071== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43071== Open file descriptor 12: ==43071== at 0x87D70FD: pipe (pipe.c:29) ==43071== by 0x1444607D: ??? ==43071== by 0xC9B74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43071== by 0x8BA5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43071== by 0x8B3ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43071== by 0x9080D38: PetscInitialize (pinit.c:924) ==43071== by 0x8402E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43071== by 0x8402EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43071== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43071== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43071== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43071== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43071== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43071== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==43071== ==43071== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43071== at 0x87DBA9C: __open_nocancel (open64_nocancel.c:39) ==43071== by 0x875FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43071== by 0x843F822: ??? ==43071== by 0x843F96F: ??? ==43071== by 0xCA5C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43071== by 0xCA5C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43071== by 0xCA12922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43071== by 0xC9B72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43071== by 0x8BA5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43071== by 0x8B3ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43071== by 0x9080D38: PetscInitialize (pinit.c:924) ==43071== by 0x8402E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43071== by 0x8402EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43071== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43071== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43071== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43071== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43071== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43071== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==43071== ==43071== Open file descriptor 145: ==43071== ==43071== ==43071== Open file descriptor 142: ==43071== ==43071== ==43071== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGeneralizedRushLarsen_valgrind.txt ==43071== ==43071== ==43071== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43071== ==43071== ==43071== ==43071== HEAP SUMMARY: ==43071== in use at exit: 38,715 bytes in 293 blocks ==43071== total heap usage: 3,038,056 allocs, 3,037,763 frees, 281,637,251 bytes allocated ==43071== ==43071== LEAK SUMMARY: ==43071== definitely lost: 0 bytes in 0 blocks ==43071== indirectly lost: 0 bytes in 0 blocks ==43071== possibly lost: 0 bytes in 0 blocks ==43071== still reachable: 3,629 bytes in 10 blocks ==43071== suppressed: 35,086 bytes in 283 blocks ==43071== Reachable blocks (those to which a pointer was found) are not shown. ==43071== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43071== ==43071== For lists of detected and suppressed errors, rerun with: -s ==43071== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)