==41487== Memcheck, a memory error detector ==41487== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41487== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41487== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestSingleOdeWntCellCycleModel -malloc_debug -malloc_dump -memory_info ==41487== Parent PID: 24524 ==41487== ==41487== ==41487== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41487== Open file descriptor 12: ==41487== at 0x112B10FD: pipe (pipe.c:29) ==41487== by 0x1BDC207D: ??? ==41487== by 0x15F0B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41487== by 0x10BB9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41487== by 0x10B52D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41487== by 0x6277D38: PetscInitialize (pinit.c:924) ==41487== by 0x10A9BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41487== by 0x10A9BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41487== by 0x18B9F9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41487== by 0x184159: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41487== by 0x187468: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41487== by 0x187363: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41487== by 0x187977: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41487== by 0x181D95: main (TestSingleOdeWntCellCycleModel.cpp:18) ==41487== ==41487== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41487== at 0x112B5A9C: __open_nocancel (open64_nocancel.c:39) ==41487== by 0x11239BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41487== by 0x6121822: ??? ==41487== by 0x612196F: ??? ==41487== by 0x15FB06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41487== by 0x15FB0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41487== by 0x15F66922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41487== by 0x15F0B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41487== by 0x10BB9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41487== by 0x10B52D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41487== by 0x6277D38: PetscInitialize (pinit.c:924) ==41487== by 0x10A9BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41487== by 0x10A9BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41487== by 0x18B9F9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41487== by 0x184159: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41487== by 0x187468: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41487== by 0x187363: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41487== by 0x187977: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41487== by 0x181D95: main (TestSingleOdeWntCellCycleModel.cpp:18) ==41487== ==41487== Open file descriptor 145: ==41487== ==41487== ==41487== Open file descriptor 142: ==41487== ==41487== ==41487== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSingleOdeWntCellCycleModel_valgrind.txt ==41487== ==41487== ==41487== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41487== ==41487== ==41487== ==41487== HEAP SUMMARY: ==41487== in use at exit: 35,359 bytes in 292 blocks ==41487== total heap usage: 247,262 allocs, 246,970 frees, 26,244,640 bytes allocated ==41487== ==41487== LEAK SUMMARY: ==41487== definitely lost: 0 bytes in 0 blocks ==41487== indirectly lost: 0 bytes in 0 blocks ==41487== possibly lost: 0 bytes in 0 blocks ==41487== still reachable: 200 bytes in 5 blocks ==41487== suppressed: 35,159 bytes in 287 blocks ==41487== Reachable blocks (those to which a pointer was found) are not shown. ==41487== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41487== ==41487== For lists of detected and suppressed errors, rerun with: -s ==41487== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)