==41560== Memcheck, a memory error detector ==41560== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41560== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41560== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVertexCryptBoundaryForce -malloc_debug -malloc_dump -memory_info ==41560== Parent PID: 24524 ==41560== ==41560== ==41560== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41560== Open file descriptor 12: ==41560== at 0x11B030FD: pipe (pipe.c:29) ==41560== by 0x1BDC307D: ??? ==41560== by 0x14E324CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41560== by 0x12527418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41560== by 0x124C0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41560== by 0x1266CD38: PetscInitialize (pinit.c:924) ==41560== by 0x11403E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41560== by 0x11403EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41560== by 0x126AD2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41560== by 0x11FE4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41560== by 0x1228FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41560== by 0x12279C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41560== by 0x122E33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41560== by 0x11E275: main (TestVertexCryptBoundaryForce.cpp:19) ==41560== ==41560== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41560== at 0x11B07A9C: __open_nocancel (open64_nocancel.c:39) ==41560== by 0x11A8BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41560== by 0x11440822: ??? ==41560== by 0x1144096F: ??? ==41560== by 0x14ED76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41560== by 0x14ED7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41560== by 0x14E8D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41560== by 0x14E322DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41560== by 0x12527418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41560== by 0x124C0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41560== by 0x1266CD38: PetscInitialize (pinit.c:924) ==41560== by 0x11403E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41560== by 0x11403EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41560== by 0x126AD2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41560== by 0x11FE4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41560== by 0x1228FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41560== by 0x12279C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41560== by 0x122E33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41560== by 0x11E275: main (TestVertexCryptBoundaryForce.cpp:19) ==41560== ==41560== Open file descriptor 145: ==41560== ==41560== ==41560== Open file descriptor 142: ==41560== ==41560== ==41560== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexCryptBoundaryForce_valgrind.txt ==41560== ==41560== ==41560== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41560== ==41560== ==41560== ==41560== HEAP SUMMARY: ==41560== in use at exit: 35,215 bytes in 290 blocks ==41560== total heap usage: 40,682 allocs, 40,392 frees, 8,129,709 bytes allocated ==41560== ==41560== LEAK SUMMARY: ==41560== definitely lost: 0 bytes in 0 blocks ==41560== indirectly lost: 0 bytes in 0 blocks ==41560== possibly lost: 0 bytes in 0 blocks ==41560== still reachable: 56 bytes in 3 blocks ==41560== suppressed: 35,159 bytes in 287 blocks ==41560== Reachable blocks (those to which a pointer was found) are not shown. ==41560== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41560== ==41560== For lists of detected and suppressed errors, rerun with: -s ==41560== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)