==42342== Memcheck, a memory error detector ==42342== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42342== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42342== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem -malloc_debug -malloc_dump -memory_info ==42342== Parent PID: 24098 ==42342== ==42342== ==42342== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42342== Open file descriptor 12: ==42342== at 0x85940FD: pipe (pipe.c:29) ==42342== by 0x1436407D: ??? ==42342== by 0xC8D54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42342== by 0x8962418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42342== by 0x88FBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42342== by 0x8E3DD38: PetscInitialize (pinit.c:924) ==42342== by 0x81BDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42342== by 0x81BDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42342== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42342== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42342== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42342== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42342== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42342== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==42342== ==42342== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42342== at 0x8598A9C: __open_nocancel (open64_nocancel.c:39) ==42342== by 0x851CBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42342== by 0x81FA822: ??? ==42342== by 0x81FA96F: ??? ==42342== by 0xC97A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42342== by 0xC97A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42342== by 0xC930922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42342== by 0xC8D52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42342== by 0x8962418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42342== by 0x88FBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42342== by 0x8E3DD38: PetscInitialize (pinit.c:924) ==42342== by 0x81BDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42342== by 0x81BDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42342== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42342== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42342== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42342== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42342== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42342== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==42342== ==42342== Open file descriptor 145: ==42342== ==42342== ==42342== Open file descriptor 142: ==42342== ==42342== ==42342== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem_valgrind.txt ==42342== ==42342== ==42342== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42342== ==42342== ==42342== ==42342== HEAP SUMMARY: ==42342== in use at exit: 35,183 bytes in 289 blocks ==42342== total heap usage: 32,817 allocs, 32,528 frees, 7,449,893 bytes allocated ==42342== ==42342== LEAK SUMMARY: ==42342== definitely lost: 0 bytes in 0 blocks ==42342== indirectly lost: 0 bytes in 0 blocks ==42342== possibly lost: 0 bytes in 0 blocks ==42342== still reachable: 24 bytes in 2 blocks ==42342== suppressed: 35,159 bytes in 287 blocks ==42342== Reachable blocks (those to which a pointer was found) are not shown. ==42342== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42342== ==42342== For lists of detected and suppressed errors, rerun with: -s ==42342== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)