==39667== Memcheck, a memory error detector ==39667== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39667== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39667== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestStepSizeException -malloc_debug -malloc_dump -memory_info ==39667== Parent PID: 24152 ==39667== ==39667== ==39667== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39667== Open file descriptor 12: ==39667== at 0x4CC50FD: pipe (pipe.c:29) ==39667== by 0xAEBF07D: ??? ==39667== by 0x644D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39667== by 0x4EC0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39667== by 0x4E59D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39667== by 0x5047D38: PetscInitialize (pinit.c:924) ==39667== by 0x4908E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39667== by 0x4908EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39667== by 0x113D54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==39667== by 0x10F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39667== by 0x111C9E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39667== by 0x111B3E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39667== by 0x1121D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39667== by 0x10D735: main (TestStepSizeException.cpp:19) ==39667== ==39667== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39667== at 0x4CC9A9C: __open_nocancel (open64_nocancel.c:39) ==39667== by 0x4C4DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39667== by 0x4945822: ??? ==39667== by 0x494596F: ??? ==39667== by 0x64F26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39667== by 0x64F2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39667== by 0x64A8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39667== by 0x644D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39667== by 0x4EC0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39667== by 0x4E59D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39667== by 0x5047D38: PetscInitialize (pinit.c:924) ==39667== by 0x4908E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39667== by 0x4908EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39667== by 0x113D54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==39667== by 0x10F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39667== by 0x111C9E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39667== by 0x111B3E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39667== by 0x1121D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39667== by 0x10D735: main (TestStepSizeException.cpp:19) ==39667== ==39667== Open file descriptor 145: ==39667== ==39667== ==39667== Open file descriptor 142: ==39667== ==39667== ==39667== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestStepSizeException_valgrind.txt ==39667== ==39667== ==39667== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39667== ==39667== ==39667== ==39667== HEAP SUMMARY: ==39667== in use at exit: 34,687 bytes in 289 blocks ==39667== total heap usage: 28,728 allocs, 28,439 frees, 7,073,997 bytes allocated ==39667== ==39667== LEAK SUMMARY: ==39667== definitely lost: 0 bytes in 0 blocks ==39667== indirectly lost: 0 bytes in 0 blocks ==39667== possibly lost: 0 bytes in 0 blocks ==39667== still reachable: 24 bytes in 2 blocks ==39667== suppressed: 34,663 bytes in 287 blocks ==39667== Reachable blocks (those to which a pointer was found) are not shown. ==39667== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39667== ==39667== For lists of detected and suppressed errors, rerun with: -s ==39667== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)