==41929== Memcheck, a memory error detector ==41929== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41929== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41929== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainWithSvi -malloc_debug -malloc_dump -memory_info ==41929== Parent PID: 24647 ==41929== ==41929== ==41929== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41929== Open file descriptor 12: ==41929== at 0xA8F80FD: pipe (pipe.c:29) ==41929== by 0x1444707D: ??? ==41929== by 0xD6D84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41929== by 0xACC4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41929== by 0xAC5DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41929== by 0xB1A1D38: PetscInitialize (pinit.c:924) ==41929== by 0xA1DCE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41929== by 0xA1DCEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41929== by 0x120EA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41929== by 0x11C673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41929== by 0x11EA90: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41929== by 0x11E98B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41929== by 0x11EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41929== by 0x11AE75: main (TestBidomainWithSvi.cpp:18) ==41929== ==41929== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41929== at 0xA8FCA9C: __open_nocancel (open64_nocancel.c:39) ==41929== by 0xA880BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41929== by 0xA219822: ??? ==41929== by 0xA21996F: ??? ==41929== by 0xD77D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41929== by 0xD77D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41929== by 0xD733922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41929== by 0xD6D82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41929== by 0xACC4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41929== by 0xAC5DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41929== by 0xB1A1D38: PetscInitialize (pinit.c:924) ==41929== by 0xA1DCE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41929== by 0xA1DCEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41929== by 0x120EA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41929== by 0x11C673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41929== by 0x11EA90: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41929== by 0x11E98B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41929== by 0x11EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41929== by 0x11AE75: main (TestBidomainWithSvi.cpp:18) ==41929== ==41929== Open file descriptor 145: ==41929== ==41929== ==41929== Open file descriptor 142: ==41929== ==41929== ==41929== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainWithSvi_valgrind.txt ==41929== ==41929== ==41929== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41929== ==41929== ==41929== ==41929== HEAP SUMMARY: ==41929== in use at exit: 35,590 bytes in 295 blocks ==41929== total heap usage: 3,523,867 allocs, 3,523,572 frees, 715,570,021 bytes allocated ==41929== ==41929== LEAK SUMMARY: ==41929== definitely lost: 0 bytes in 0 blocks ==41929== indirectly lost: 0 bytes in 0 blocks ==41929== possibly lost: 0 bytes in 0 blocks ==41929== still reachable: 24 bytes in 2 blocks ==41929== suppressed: 35,566 bytes in 293 blocks ==41929== Reachable blocks (those to which a pointer was found) are not shown. ==41929== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41929== ==41929== For lists of detected and suppressed errors, rerun with: -s ==41929== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 69 from 31)