==40370== Memcheck, a memory error detector ==40370== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40370== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40370== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestWntCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==40370== Parent PID: 24118 ==40370== ==40370== ==40370== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40370== Open file descriptor 12: ==40370== at 0x1086D0FD: pipe (pipe.c:29) ==40370== by 0x1B39D07D: ??? ==40370== by 0x155384CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40370== by 0x104BA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40370== by 0x10453D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40370== by 0x6277D38: PetscInitialize (pinit.c:924) ==40370== by 0x1039CE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40370== by 0x1039CEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40370== by 0x1264BD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40370== by 0x1217C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40370== by 0x123E3A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40370== by 0x123D36: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40370== by 0x124349: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40370== by 0x11FFC5: main (TestWntCellCycleOdeSystem.cpp:18) ==40370== ==40370== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40370== at 0x10871A9C: __open_nocancel (open64_nocancel.c:39) ==40370== by 0x107F5BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40370== by 0x6121822: ??? ==40370== by 0x612196F: ??? ==40370== by 0x155DD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40370== by 0x155DD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40370== by 0x15593922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40370== by 0x155382DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40370== by 0x104BA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40370== by 0x10453D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40370== by 0x6277D38: PetscInitialize (pinit.c:924) ==40370== by 0x1039CE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40370== by 0x1039CEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40370== by 0x1264BD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40370== by 0x1217C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40370== by 0x123E3A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40370== by 0x123D36: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40370== by 0x124349: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40370== by 0x11FFC5: main (TestWntCellCycleOdeSystem.cpp:18) ==40370== ==40370== Open file descriptor 145: ==40370== ==40370== ==40370== Open file descriptor 142: ==40370== ==40370== ==40370== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestWntCellCycleOdeSystem_valgrind.txt ==40370== ==40370== ==40370== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40370== ==40370== ==40370== ==40370== HEAP SUMMARY: ==40370== in use at exit: 35,183 bytes in 289 blocks ==40370== total heap usage: 169,372 allocs, 169,083 frees, 88,837,748 bytes allocated ==40370== ==40370== LEAK SUMMARY: ==40370== definitely lost: 0 bytes in 0 blocks ==40370== indirectly lost: 0 bytes in 0 blocks ==40370== possibly lost: 0 bytes in 0 blocks ==40370== still reachable: 24 bytes in 2 blocks ==40370== suppressed: 35,159 bytes in 287 blocks ==40370== Reachable blocks (those to which a pointer was found) are not shown. ==40370== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40370== ==40370== For lists of detected and suppressed errors, rerun with: -s ==40370== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)