==40606== Memcheck, a memory error detector ==40606== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40606== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40606== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVertexCryptBoundaryForce -malloc_debug -malloc_dump -memory_info ==40606== Parent PID: 23919 ==40606== ==40606== ==40606== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40606== Open file descriptor 12: ==40606== at 0x110DF0FD: pipe (pipe.c:29) ==40606== by 0x1B39F07D: ??? ==40606== by 0x143E54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40606== by 0x11B03418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40606== by 0x11A9CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40606== by 0x11C48D38: PetscInitialize (pinit.c:924) ==40606== by 0x109DFE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40606== by 0x109DFEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40606== by 0x126AD2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40606== by 0x11FE4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40606== by 0x1228FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40606== by 0x12279C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40606== by 0x122E33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40606== by 0x11E275: main (TestVertexCryptBoundaryForce.cpp:19) ==40606== ==40606== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40606== at 0x110E3A9C: __open_nocancel (open64_nocancel.c:39) ==40606== by 0x11067BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40606== by 0x10A1C822: ??? ==40606== by 0x10A1C96F: ??? ==40606== by 0x1448A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40606== by 0x1448A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40606== by 0x14440922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40606== by 0x143E52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40606== by 0x11B03418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40606== by 0x11A9CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40606== by 0x11C48D38: PetscInitialize (pinit.c:924) ==40606== by 0x109DFE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40606== by 0x109DFEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40606== by 0x126AD2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40606== by 0x11FE4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40606== by 0x1228FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40606== by 0x12279C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40606== by 0x122E33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40606== by 0x11E275: main (TestVertexCryptBoundaryForce.cpp:19) ==40606== ==40606== Open file descriptor 145: ==40606== ==40606== ==40606== Open file descriptor 142: ==40606== ==40606== ==40606== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexCryptBoundaryForce_valgrind.txt ==40606== ==40606== ==40606== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40606== ==40606== ==40606== ==40606== HEAP SUMMARY: ==40606== in use at exit: 36,685 bytes in 311 blocks ==40606== total heap usage: 40,259 allocs, 39,948 frees, 8,132,130 bytes allocated ==40606== ==40606== LEAK SUMMARY: ==40606== definitely lost: 0 bytes in 0 blocks ==40606== indirectly lost: 0 bytes in 0 blocks ==40606== possibly lost: 0 bytes in 0 blocks ==40606== still reachable: 56 bytes in 3 blocks ==40606== suppressed: 36,629 bytes in 308 blocks ==40606== Reachable blocks (those to which a pointer was found) are not shown. ==40606== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40606== ==40606== For lists of detected and suppressed errors, rerun with: -s ==40606== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)