==24877== Memcheck, a memory error detector ==24877== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==24877== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==24877== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestHoneycombVertexMeshGenerator -malloc_debug -malloc_dump -memory_info ==24877== Parent PID: 24164 ==24877== ==24877== ==24877== FILE DESCRIPTORS: 9 open (3 std) at exit. ==24877== Open file descriptor 12: ==24877== at 0x6C730FD: pipe (pipe.c:29) ==24877== by 0x100EB07D: ??? ==24877== by 0x956F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24877== by 0x6EFF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24877== by 0x6E98D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24877== by 0x77E3D38: PetscInitialize (pinit.c:924) ==24877== by 0x6571E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24877== by 0x6571EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24877== by 0x1146C4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==24877== by 0x110053: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==24877== by 0x112582: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==24877== by 0x11247D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24877== by 0x112A91: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24877== by 0x10E855: main (TestHoneycombVertexMeshGenerator.cpp:18) ==24877== ==24877== Open file descriptor 8: /dev/shm/open_mpi.0000 ==24877== at 0x6C77A9C: __open_nocancel (open64_nocancel.c:39) ==24877== by 0x6BFBBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==24877== by 0x65AE822: ??? ==24877== by 0x65AE96F: ??? ==24877== by 0x96146DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24877== by 0x9614938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24877== by 0x95CA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24877== by 0x956F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24877== by 0x6EFF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24877== by 0x6E98D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24877== by 0x77E3D38: PetscInitialize (pinit.c:924) ==24877== by 0x6571E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24877== by 0x6571EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24877== by 0x1146C4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==24877== by 0x110053: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==24877== by 0x112582: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==24877== by 0x11247D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24877== by 0x112A91: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24877== by 0x10E855: main (TestHoneycombVertexMeshGenerator.cpp:18) ==24877== ==24877== Open file descriptor 145: ==24877== ==24877== ==24877== Open file descriptor 142: ==24877== ==24877== ==24877== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHoneycombVertexMeshGenerator_valgrind.txt ==24877== ==24877== ==24877== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==24877== ==24877== ==24877== ==24877== HEAP SUMMARY: ==24877== in use at exit: 35,071 bytes in 289 blocks ==24877== total heap usage: 396,450 allocs, 396,161 frees, 26,568,620 bytes allocated ==24877== ==24877== LEAK SUMMARY: ==24877== definitely lost: 0 bytes in 0 blocks ==24877== indirectly lost: 0 bytes in 0 blocks ==24877== possibly lost: 0 bytes in 0 blocks ==24877== still reachable: 24 bytes in 2 blocks ==24877== suppressed: 35,047 bytes in 287 blocks ==24877== Reachable blocks (those to which a pointer was found) are not shown. ==24877== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==24877== ==24877== For lists of detected and suppressed errors, rerun with: -s ==24877== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)