==40871== Memcheck, a memory error detector ==40871== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40871== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40871== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestPottsBasedCryptSimulation -malloc_debug -malloc_dump -memory_info ==40871== Parent PID: 24157 ==40871== ==40871== ==40871== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40871== Open file descriptor 12: ==40871== at 0x110DF0FD: pipe (pipe.c:29) ==40871== by 0x1B39F07D: ??? ==40871== by 0x143E54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40871== by 0x11B03418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40871== by 0x11A9CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40871== by 0x11C48D38: PetscInitialize (pinit.c:924) ==40871== by 0x109DFEB3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40871== by 0x109DFF1F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:95) ==40871== by 0x122076: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40871== by 0x11D6B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40871== by 0x11FAA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40871== by 0x11F9A1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40871== by 0x11FFB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40871== by 0x11BEB5: main (TestPottsBasedCryptSimulation.cpp:18) ==40871== ==40871== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40871== at 0x110E3A9C: __open_nocancel (open64_nocancel.c:39) ==40871== by 0x11067BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40871== by 0x10A1C822: ??? ==40871== by 0x10A1C96F: ??? ==40871== by 0x1448A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40871== by 0x1448A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40871== by 0x14440922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40871== by 0x143E52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40871== by 0x11B03418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40871== by 0x11A9CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40871== by 0x11C48D38: PetscInitialize (pinit.c:924) ==40871== by 0x109DFEB3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40871== by 0x109DFF1F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:95) ==40871== by 0x122076: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40871== by 0x11D6B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40871== by 0x11FAA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40871== by 0x11F9A1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40871== by 0x11FFB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40871== by 0x11BEB5: main (TestPottsBasedCryptSimulation.cpp:18) ==40871== ==40871== Open file descriptor 145: ==40871== ==40871== ==40871== Open file descriptor 142: ==40871== ==40871== ==40871== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsBasedCryptSimulation_valgrind.txt ==40871== ==40871== ==40871== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40871== ==40871== ==40871== ==40871== HEAP SUMMARY: ==40871== in use at exit: 35,222 bytes in 287 blocks ==40871== total heap usage: 46,824,450 allocs, 46,824,163 frees, 4,261,531,286 bytes allocated ==40871== ==40871== LEAK SUMMARY: ==40871== definitely lost: 0 bytes in 0 blocks ==40871== indirectly lost: 0 bytes in 0 blocks ==40871== possibly lost: 0 bytes in 0 blocks ==40871== still reachable: 136 bytes in 4 blocks ==40871== suppressed: 35,086 bytes in 283 blocks ==40871== Reachable blocks (those to which a pointer was found) are not shown. ==40871== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40871== ==40871== For lists of detected and suppressed errors, rerun with: -s ==40871== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)