==40430== Memcheck, a memory error detector ==40430== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40430== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40430== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVertexCryptBoundaryForce -malloc_debug -malloc_dump -memory_info ==40430== Parent PID: 24157 ==40430== ==40430== ==40430== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40430== Open file descriptor 12: ==40430== at 0x110DF0FD: pipe (pipe.c:29) ==40430== by 0x1B39F07D: ??? ==40430== by 0x143E54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40430== by 0x11B03418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40430== by 0x11A9CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40430== by 0x11C48D38: PetscInitialize (pinit.c:924) ==40430== by 0x109DFEB3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40430== by 0x109DFF1F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:95) ==40430== by 0x126AD2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40430== by 0x11FE4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40430== by 0x1228FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40430== by 0x12279C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40430== by 0x122E33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40430== by 0x11E275: main (TestVertexCryptBoundaryForce.cpp:19) ==40430== ==40430== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40430== at 0x110E3A9C: __open_nocancel (open64_nocancel.c:39) ==40430== by 0x11067BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40430== by 0x10A1C822: ??? ==40430== by 0x10A1C96F: ??? ==40430== by 0x1448A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40430== by 0x1448A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40430== by 0x14440922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40430== by 0x143E52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40430== by 0x11B03418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40430== by 0x11A9CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40430== by 0x11C48D38: PetscInitialize (pinit.c:924) ==40430== by 0x109DFEB3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40430== by 0x109DFF1F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:95) ==40430== by 0x126AD2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40430== by 0x11FE4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40430== by 0x1228FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40430== by 0x12279C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40430== by 0x122E33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40430== by 0x11E275: main (TestVertexCryptBoundaryForce.cpp:19) ==40430== ==40430== Open file descriptor 145: ==40430== ==40430== ==40430== Open file descriptor 142: ==40430== ==40430== ==40430== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexCryptBoundaryForce_valgrind.txt ==40430== ==40430== ==40430== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40430== ==40430== ==40430== ==40430== HEAP SUMMARY: ==40430== in use at exit: 35,215 bytes in 290 blocks ==40430== total heap usage: 40,305 allocs, 40,015 frees, 8,095,220 bytes allocated ==40430== ==40430== LEAK SUMMARY: ==40430== definitely lost: 0 bytes in 0 blocks ==40430== indirectly lost: 0 bytes in 0 blocks ==40430== possibly lost: 0 bytes in 0 blocks ==40430== still reachable: 56 bytes in 3 blocks ==40430== suppressed: 35,159 bytes in 287 blocks ==40430== Reachable blocks (those to which a pointer was found) are not shown. ==40430== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40430== ==40430== For lists of detected and suppressed errors, rerun with: -s ==40430== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)