==40968== Memcheck, a memory error detector ==40968== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40968== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40968== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainWithSvi -malloc_debug -malloc_dump -memory_info ==40968== Parent PID: 23959 ==40968== ==40968== ==40968== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40968== Open file descriptor 12: ==40968== at 0xA8420FD: pipe (pipe.c:29) ==40968== by 0x1438F07D: ??? ==40968== by 0xD61E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40968== by 0xAC0E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40968== by 0xABA7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40968== by 0xB0EBD38: PetscInitialize (pinit.c:924) ==40968== by 0xA126E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40968== by 0xA126EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40968== by 0x120EA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40968== by 0x11C673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40968== by 0x11EA90: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40968== by 0x11E98B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40968== by 0x11EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40968== by 0x11AE75: main (TestBidomainWithSvi.cpp:18) ==40968== ==40968== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40968== at 0xA846A9C: __open_nocancel (open64_nocancel.c:39) ==40968== by 0xA7CABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40968== by 0xA163822: ??? ==40968== by 0xA16396F: ??? ==40968== by 0xD6C36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40968== by 0xD6C3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40968== by 0xD679922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40968== by 0xD61E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40968== by 0xAC0E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40968== by 0xABA7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40968== by 0xB0EBD38: PetscInitialize (pinit.c:924) ==40968== by 0xA126E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40968== by 0xA126EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40968== by 0x120EA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40968== by 0x11C673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40968== by 0x11EA90: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40968== by 0x11E98B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40968== by 0x11EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40968== by 0x11AE75: main (TestBidomainWithSvi.cpp:18) ==40968== ==40968== Open file descriptor 145: ==40968== ==40968== ==40968== Open file descriptor 142: ==40968== ==40968== ==40968== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainWithSvi_valgrind.txt ==40968== ==40968== ==40968== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40968== ==40968== ==40968== ==40968== HEAP SUMMARY: ==40968== in use at exit: 17,425 bytes in 78 blocks ==40968== total heap usage: 3,523,356 allocs, 3,523,278 frees, 714,482,427 bytes allocated ==40968== ==40968== LEAK SUMMARY: ==40968== definitely lost: 0 bytes in 0 blocks ==40968== indirectly lost: 0 bytes in 0 blocks ==40968== possibly lost: 0 bytes in 0 blocks ==40968== still reachable: 24 bytes in 2 blocks ==40968== suppressed: 17,401 bytes in 76 blocks ==40968== Reachable blocks (those to which a pointer was found) are not shown. ==40968== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40968== ==40968== For lists of detected and suppressed errors, rerun with: -s ==40968== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 69 from 31)