==25777== Memcheck, a memory error detector ==25777== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25777== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25777== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==25777== Parent PID: 23959 ==25777== ==25777== ==25777== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25777== Open file descriptor 12: ==25777== at 0xF0AC0FD: pipe (pipe.c:29) ==25777== by 0x1970607D: ??? ==25777== by 0x13C9D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25777== by 0xECF9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25777== by 0xEC92D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25777== by 0xD989D38: PetscInitialize (pinit.c:924) ==25777== by 0xD4B1E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25777== by 0xD4B1EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25777== by 0x133ACB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25777== by 0x12CEE3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25777== by 0x12FA38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25777== by 0x12F933: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25777== by 0x12FF47: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25777== by 0x12B6E5: main (TestCaUpdateRules.cpp:18) ==25777== ==25777== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25777== at 0xF0B0A9C: __open_nocancel (open64_nocancel.c:39) ==25777== by 0xF034BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25777== by 0xD4EE822: ??? ==25777== by 0xD4EE96F: ??? ==25777== by 0x13D426DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25777== by 0x13D42938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25777== by 0x13CF8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25777== by 0x13C9D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25777== by 0xECF9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25777== by 0xEC92D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25777== by 0xD989D38: PetscInitialize (pinit.c:924) ==25777== by 0xD4B1E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25777== by 0xD4B1EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25777== by 0x133ACB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25777== by 0x12CEE3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25777== by 0x12FA38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25777== by 0x12F933: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25777== by 0x12FF47: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25777== by 0x12B6E5: main (TestCaUpdateRules.cpp:18) ==25777== ==25777== Open file descriptor 145: ==25777== ==25777== ==25777== Open file descriptor 142: ==25777== ==25777== ==25777== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==25777== ==25777== ==25777== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25777== ==25777== ==25777== ==25777== HEAP SUMMARY: ==25777== in use at exit: 17,034 bytes in 73 blocks ==25777== total heap usage: 37,604 allocs, 37,531 frees, 6,955,827 bytes allocated ==25777== ==25777== LEAK SUMMARY: ==25777== definitely lost: 0 bytes in 0 blocks ==25777== indirectly lost: 0 bytes in 0 blocks ==25777== possibly lost: 0 bytes in 0 blocks ==25777== still reachable: 56 bytes in 3 blocks ==25777== suppressed: 16,978 bytes in 70 blocks ==25777== Reachable blocks (those to which a pointer was found) are not shown. ==25777== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25777== ==25777== For lists of detected and suppressed errors, rerun with: -s ==25777== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)