==39672== Memcheck, a memory error detector ==39672== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39672== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39672== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellMutationStateTutorial -malloc_debug -malloc_dump -memory_info ==39672== Parent PID: 23959 ==39672== ==39672== ==39672== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39672== Open file descriptor 12: ==39672== at 0x10D420FD: pipe (pipe.c:29) ==39672== by 0x1970507D: ??? ==39672== by 0x14CB94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39672== by 0x1098F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39672== by 0x10928D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39672== by 0xF61FD38: PetscInitialize (pinit.c:924) ==39672== by 0xF149E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39672== by 0xF149EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39672== by 0x14A99B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39672== by 0x1452D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39672== by 0x147FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39672== by 0x147E72: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39672== by 0x148509: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39672== by 0x1436F5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==39672== ==39672== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39672== at 0x10D46A9C: __open_nocancel (open64_nocancel.c:39) ==39672== by 0x10CCABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39672== by 0xF186822: ??? ==39672== by 0xF18696F: ??? ==39672== by 0x14D5E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39672== by 0x14D5E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39672== by 0x14D14922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39672== by 0x14CB92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39672== by 0x1098F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39672== by 0x10928D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39672== by 0xF61FD38: PetscInitialize (pinit.c:924) ==39672== by 0xF149E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39672== by 0xF149EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39672== by 0x14A99B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39672== by 0x1452D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39672== by 0x147FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39672== by 0x147E72: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39672== by 0x148509: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39672== by 0x1436F5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==39672== ==39672== Open file descriptor 145: ==39672== ==39672== ==39672== Open file descriptor 142: ==39672== ==39672== ==39672== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellMutationStateTutorial_valgrind.txt ==39672== ==39672== ==39672== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39672== ==39672== ==39672== ==39672== HEAP SUMMARY: ==39672== in use at exit: 16,961 bytes in 69 blocks ==39672== total heap usage: 4,125,827 allocs, 4,125,758 frees, 569,307,859 bytes allocated ==39672== ==39672== LEAK SUMMARY: ==39672== definitely lost: 0 bytes in 0 blocks ==39672== indirectly lost: 0 bytes in 0 blocks ==39672== possibly lost: 0 bytes in 0 blocks ==39672== still reachable: 56 bytes in 3 blocks ==39672== suppressed: 16,905 bytes in 66 blocks ==39672== Reachable blocks (those to which a pointer was found) are not shown. ==39672== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39672== ==39672== For lists of detected and suppressed errors, rerun with: -s ==39672== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)