==25437== Memcheck, a memory error detector ==25437== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25437== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25437== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestEllipticGrowingDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25437== Parent PID: 23959 ==25437== ==25437== ==25437== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25437== Open file descriptor 12: ==25437== at 0x111C50FD: pipe (pipe.c:29) ==25437== by 0x1970607D: ??? ==25437== by 0x14CB24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25437== by 0x10D2B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25437== by 0x10CC4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25437== by 0xF9BBD38: PetscInitialize (pinit.c:924) ==25437== by 0xF4E5E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25437== by 0xF4E5EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25437== by 0x141C51: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25437== by 0x13BD3D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25437== by 0x13EDD4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25437== by 0x13EC74: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25437== by 0x13F30B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25437== by 0x13A165: main (TestEllipticGrowingDomainPdeModifier.cpp:19) ==25437== ==25437== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25437== at 0x111C9A9C: __open_nocancel (open64_nocancel.c:39) ==25437== by 0x1114DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25437== by 0xF522822: ??? ==25437== by 0xF52296F: ??? ==25437== by 0x14D576DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25437== by 0x14D57938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25437== by 0x14D0D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25437== by 0x14CB22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25437== by 0x10D2B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25437== by 0x10CC4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25437== by 0xF9BBD38: PetscInitialize (pinit.c:924) ==25437== by 0xF4E5E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25437== by 0xF4E5EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25437== by 0x141C51: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25437== by 0x13BD3D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25437== by 0x13EDD4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25437== by 0x13EC74: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25437== by 0x13F30B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25437== by 0x13A165: main (TestEllipticGrowingDomainPdeModifier.cpp:19) ==25437== ==25437== Open file descriptor 145: ==25437== ==25437== ==25437== Open file descriptor 142: ==25437== ==25437== ==25437== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestEllipticGrowingDomainPdeModifier_valgrind.txt ==25437== ==25437== ==25437== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25437== ==25437== ==25437== ==25437== HEAP SUMMARY: ==25437== in use at exit: 17,034 bytes in 73 blocks ==25437== total heap usage: 871,662 allocs, 871,589 frees, 57,027,431 bytes allocated ==25437== ==25437== LEAK SUMMARY: ==25437== definitely lost: 0 bytes in 0 blocks ==25437== indirectly lost: 0 bytes in 0 blocks ==25437== possibly lost: 0 bytes in 0 blocks ==25437== still reachable: 56 bytes in 3 blocks ==25437== suppressed: 16,978 bytes in 70 blocks ==25437== Reachable blocks (those to which a pointer was found) are not shown. ==25437== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25437== ==25437== For lists of detected and suppressed errors, rerun with: -s ==25437== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)