==40863== Memcheck, a memory error detector ==40863== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40863== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40863== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestMajorAirwaysCentreLinesCleaner -malloc_debug -malloc_dump -memory_info ==40863== Parent PID: 23959 ==40863== ==40863== ==40863== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40863== Open file descriptor 12: ==40863== at 0x82730FD: pipe (pipe.c:29) ==40863== by 0x107F707D: ??? ==40863== by 0xBD334CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40863== by 0x7B7B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40863== by 0x7B14D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40863== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==40863== by 0x7A3AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40863== by 0x7A3AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40863== by 0x11675D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40863== by 0x1121F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40863== by 0x1146F0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40863== by 0x1145EB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40863== by 0x114BFF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40863== by 0x1109F5: main (TestMajorAirwaysCentreLinesCleaner.cpp:18) ==40863== ==40863== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40863== at 0x8277A9C: __open_nocancel (open64_nocancel.c:39) ==40863== by 0x81FBBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40863== by 0x7A77822: ??? ==40863== by 0x7A7796F: ??? ==40863== by 0xBDD86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40863== by 0xBDD8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40863== by 0xBD8E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40863== by 0xBD332DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40863== by 0x7B7B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40863== by 0x7B14D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40863== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==40863== by 0x7A3AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40863== by 0x7A3AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40863== by 0x11675D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40863== by 0x1121F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40863== by 0x1146F0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40863== by 0x1145EB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40863== by 0x114BFF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40863== by 0x1109F5: main (TestMajorAirwaysCentreLinesCleaner.cpp:18) ==40863== ==40863== Open file descriptor 145: ==40863== ==40863== ==40863== Open file descriptor 142: ==40863== ==40863== ==40863== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMajorAirwaysCentreLinesCleaner_valgrind.txt ==40863== ==40863== ==40863== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40863== ==40863== ==40863== ==40863== HEAP SUMMARY: ==40863== in use at exit: 17,002 bytes in 72 blocks ==40863== total heap usage: 476,668 allocs, 476,596 frees, 25,079,649 bytes allocated ==40863== ==40863== LEAK SUMMARY: ==40863== definitely lost: 0 bytes in 0 blocks ==40863== indirectly lost: 0 bytes in 0 blocks ==40863== possibly lost: 0 bytes in 0 blocks ==40863== still reachable: 24 bytes in 2 blocks ==40863== suppressed: 16,978 bytes in 70 blocks ==40863== Reachable blocks (those to which a pointer was found) are not shown. ==40863== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40863== ==40863== For lists of detected and suppressed errors, rerun with: -s ==40863== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)