==26561== Memcheck, a memory error detector ==26561== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26561== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26561== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26561== Parent PID: 23959 ==26561== ==26561== ==26561== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26561== Open file descriptor 12: ==26561== at 0xF9740FD: pipe (pipe.c:29) ==26561== by 0x1970507D: ??? ==26561== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26561== by 0x1026C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26561== by 0x10205D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26561== by 0x103B1D38: PetscInitialize (pinit.c:924) ==26561== by 0xF149E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26561== by 0xF149EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26561== by 0x214584: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26561== by 0x20BE59: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26561== by 0x20FAA8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26561== by 0x20F948: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26561== by 0x20FFDF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26561== by 0x20A275: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==26561== ==26561== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26561== at 0xF978A9C: __open_nocancel (open64_nocancel.c:39) ==26561== by 0xF8FCBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26561== by 0xF186822: ??? ==26561== by 0xF18696F: ??? ==26561== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26561== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26561== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26561== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26561== by 0x1026C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26561== by 0x10205D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26561== by 0x103B1D38: PetscInitialize (pinit.c:924) ==26561== by 0xF149E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26561== by 0xF149EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26561== by 0x214584: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26561== by 0x20BE59: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26561== by 0x20FAA8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26561== by 0x20F948: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26561== by 0x20FFDF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26561== by 0x20A275: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==26561== ==26561== Open file descriptor 145: ==26561== ==26561== ==26561== Open file descriptor 142: ==26561== ==26561== ==26561== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==26561== ==26561== ==26561== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26561== ==26561== ==26561== ==26561== HEAP SUMMARY: ==26561== in use at exit: 16,993 bytes in 70 blocks ==26561== total heap usage: 16,764,637 allocs, 16,764,567 frees, 14,229,537,202 bytes allocated ==26561== ==26561== LEAK SUMMARY: ==26561== definitely lost: 0 bytes in 0 blocks ==26561== indirectly lost: 0 bytes in 0 blocks ==26561== possibly lost: 0 bytes in 0 blocks ==26561== still reachable: 88 bytes in 4 blocks ==26561== suppressed: 16,905 bytes in 66 blocks ==26561== Reachable blocks (those to which a pointer was found) are not shown. ==26561== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26561== ==26561== For lists of detected and suppressed errors, rerun with: -s ==26561== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)