==26031== Memcheck, a memory error detector ==26031== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26031== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26031== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPeriodicNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==26031== Parent PID: 23959 ==26031== ==26031== ==26031== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26031== Open file descriptor 12: ==26031== at 0xF9300FD: pipe (pipe.c:29) ==26031== by 0x1970507D: ??? ==26031== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26031== by 0x1022A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26031== by 0x101C3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26031== by 0x103B1D38: PetscInitialize (pinit.c:924) ==26031== by 0xF149E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26031== by 0xF149EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26031== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26031== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26031== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26031== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26031== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26031== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==26031== ==26031== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26031== at 0xF934A9C: __open_nocancel (open64_nocancel.c:39) ==26031== by 0xF8B8BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26031== by 0xF186822: ??? ==26031== by 0xF18696F: ??? ==26031== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26031== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26031== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26031== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26031== by 0x1022A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26031== by 0x101C3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26031== by 0x103B1D38: PetscInitialize (pinit.c:924) ==26031== by 0xF149E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26031== by 0xF149EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26031== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26031== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26031== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26031== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26031== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26031== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==26031== ==26031== Open file descriptor 145: ==26031== ==26031== ==26031== Open file descriptor 142: ==26031== ==26031== ==26031== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPeriodicNodeBasedCellPopulationParallelMethods_valgrind.txt ==26031== ==26031== ==26031== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26031== ==26031== ==26031== ==26031== HEAP SUMMARY: ==26031== in use at exit: 17,034 bytes in 73 blocks ==26031== total heap usage: 36,374 allocs, 36,301 frees, 6,731,062 bytes allocated ==26031== ==26031== LEAK SUMMARY: ==26031== definitely lost: 0 bytes in 0 blocks ==26031== indirectly lost: 0 bytes in 0 blocks ==26031== possibly lost: 0 bytes in 0 blocks ==26031== still reachable: 56 bytes in 3 blocks ==26031== suppressed: 16,978 bytes in 70 blocks ==26031== Reachable blocks (those to which a pointer was found) are not shown. ==26031== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26031== ==26031== For lists of detected and suppressed errors, rerun with: -s ==26031== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)