==25385== Memcheck, a memory error detector ==25385== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25385== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25385== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimpleCellCycleModels -malloc_debug -malloc_dump -memory_info ==25385== Parent PID: 23959 ==25385== ==25385== ==25385== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25385== Open file descriptor 12: ==25385== at 0xED650FD: pipe (pipe.c:29) ==25385== by 0x1970607D: ??? ==25385== by 0x13C504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25385== by 0xE9B4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25385== by 0xE94DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25385== by 0xD644D38: PetscInitialize (pinit.c:924) ==25385== by 0xD4B1E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25385== by 0xD4B1EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25385== by 0x137E7B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25385== by 0x13098F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25385== by 0x133A5C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25385== by 0x1338FC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25385== by 0x133F93: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25385== by 0x12D2C5: main (TestSimpleCellCycleModels.cpp:19) ==25385== ==25385== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25385== at 0xED69A9C: __open_nocancel (open64_nocancel.c:39) ==25385== by 0xECEDBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25385== by 0xD4EE822: ??? ==25385== by 0xD4EE96F: ??? ==25385== by 0x13CF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25385== by 0x13CF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25385== by 0x13CAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25385== by 0x13C502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25385== by 0xE9B4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25385== by 0xE94DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25385== by 0xD644D38: PetscInitialize (pinit.c:924) ==25385== by 0xD4B1E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25385== by 0xD4B1EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25385== by 0x137E7B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25385== by 0x13098F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25385== by 0x133A5C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25385== by 0x1338FC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25385== by 0x133F93: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25385== by 0x12D2C5: main (TestSimpleCellCycleModels.cpp:19) ==25385== ==25385== Open file descriptor 145: ==25385== ==25385== ==25385== Open file descriptor 142: ==25385== ==25385== ==25385== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimpleCellCycleModels_valgrind.txt ==25385== ==25385== ==25385== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25385== ==25385== ==25385== ==25385== HEAP SUMMARY: ==25385== in use at exit: 17,066 bytes in 74 blocks ==25385== total heap usage: 62,245 allocs, 62,171 frees, 10,088,463 bytes allocated ==25385== ==25385== LEAK SUMMARY: ==25385== definitely lost: 0 bytes in 0 blocks ==25385== indirectly lost: 0 bytes in 0 blocks ==25385== possibly lost: 0 bytes in 0 blocks ==25385== still reachable: 88 bytes in 4 blocks ==25385== suppressed: 16,978 bytes in 70 blocks ==25385== Reachable blocks (those to which a pointer was found) are not shown. ==25385== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25385== ==25385== For lists of detected and suppressed errors, rerun with: -s ==25385== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)