==43317== Memcheck, a memory error detector ==43317== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43317== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43317== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestSpiralWaveAndPhase -malloc_debug -malloc_dump -memory_info ==43317== Parent PID: 23959 ==43317== ==43317== ==43317== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43317== Open file descriptor 12: ==43317== at 0x85160FD: pipe (pipe.c:29) ==43317== by 0x1052907D: ??? ==43317== by 0xCFE24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43317== by 0xA7DD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43317== by 0xA776D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43317== by 0x4950D38: PetscInitialize (pinit.c:924) ==43317== by 0x7D2DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43317== by 0x7D2DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43317== by 0x118FD2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43317== by 0x1147B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43317== by 0x116FAC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43317== by 0x116EA7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43317== by 0x1174BB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43317== by 0x112FB5: main (TestSpiralWaveAndPhase.cpp:18) ==43317== ==43317== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43317== at 0x851AA9C: __open_nocancel (open64_nocancel.c:39) ==43317== by 0x849EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43317== by 0x7D6A822: ??? ==43317== by 0x7D6A96F: ??? ==43317== by 0xD0876DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43317== by 0xD087938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43317== by 0xD03D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43317== by 0xCFE22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43317== by 0xA7DD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43317== by 0xA776D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43317== by 0x4950D38: PetscInitialize (pinit.c:924) ==43317== by 0x7D2DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43317== by 0x7D2DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43317== by 0x118FD2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43317== by 0x1147B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43317== by 0x116FAC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43317== by 0x116EA7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43317== by 0x1174BB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43317== by 0x112FB5: main (TestSpiralWaveAndPhase.cpp:18) ==43317== ==43317== Open file descriptor 145: ==43317== ==43317== ==43317== Open file descriptor 142: ==43317== ==43317== ==43317== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSpiralWaveAndPhase_valgrind.txt ==43317== ==43317== ==43317== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43317== ==43317== ==43317== ==43317== HEAP SUMMARY: ==43317== in use at exit: 17,345 bytes in 78 blocks ==43317== total heap usage: 4,334,863 allocs, 4,334,785 frees, 570,120,061 bytes allocated ==43317== ==43317== LEAK SUMMARY: ==43317== definitely lost: 0 bytes in 0 blocks ==43317== indirectly lost: 0 bytes in 0 blocks ==43317== possibly lost: 0 bytes in 0 blocks ==43317== still reachable: 24 bytes in 2 blocks ==43317== suppressed: 17,321 bytes in 76 blocks ==43317== Reachable blocks (those to which a pointer was found) are not shown. ==43317== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43317== ==43317== For lists of detected and suppressed errors, rerun with: -s ==43317== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 31)