==40163== Memcheck, a memory error detector ==40163== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40163== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40163== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVertexCryptBoundaryForce -malloc_debug -malloc_dump -memory_info ==40163== Parent PID: 23959 ==40163== ==40163== ==40163== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40163== Open file descriptor 12: ==40163== at 0x111100FD: pipe (pipe.c:29) ==40163== by 0x1B3CE07D: ??? ==40163== by 0x144324CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40163== by 0x11B33418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40163== by 0x11ACCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40163== by 0x11C78D38: PetscInitialize (pinit.c:924) ==40163== by 0x10A10E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40163== by 0x10A10EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40163== by 0x127AD2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40163== by 0x120E4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40163== by 0x1238FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40163== by 0x12379C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40163== by 0x123E33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40163== by 0x11F275: main (TestVertexCryptBoundaryForce.cpp:19) ==40163== ==40163== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40163== at 0x11114A9C: __open_nocancel (open64_nocancel.c:39) ==40163== by 0x11098BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40163== by 0x10A4D822: ??? ==40163== by 0x10A4D96F: ??? ==40163== by 0x144D76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40163== by 0x144D7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40163== by 0x1448D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40163== by 0x144322DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40163== by 0x11B33418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40163== by 0x11ACCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40163== by 0x11C78D38: PetscInitialize (pinit.c:924) ==40163== by 0x10A10E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40163== by 0x10A10EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40163== by 0x127AD2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40163== by 0x120E4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40163== by 0x1238FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40163== by 0x12379C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40163== by 0x123E33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40163== by 0x11F275: main (TestVertexCryptBoundaryForce.cpp:19) ==40163== ==40163== Open file descriptor 145: ==40163== ==40163== ==40163== Open file descriptor 142: ==40163== ==40163== ==40163== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexCryptBoundaryForce_valgrind.txt ==40163== ==40163== ==40163== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40163== ==40163== ==40163== ==40163== HEAP SUMMARY: ==40163== in use at exit: 17,050 bytes in 73 blocks ==40163== total heap usage: 39,802 allocs, 39,729 frees, 7,009,613 bytes allocated ==40163== ==40163== LEAK SUMMARY: ==40163== definitely lost: 0 bytes in 0 blocks ==40163== indirectly lost: 0 bytes in 0 blocks ==40163== possibly lost: 0 bytes in 0 blocks ==40163== still reachable: 56 bytes in 3 blocks ==40163== suppressed: 16,994 bytes in 70 blocks ==40163== Reachable blocks (those to which a pointer was found) are not shown. ==40163== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40163== ==40163== For lists of detected and suppressed errors, rerun with: -s ==40163== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)