==25664== Memcheck, a memory error detector ==25664== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25664== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25664== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25664== Parent PID: 24136 ==25664== ==25664== ==25664== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25664== Open file descriptor 12: ==25664== at 0x110820FD: pipe (pipe.c:29) ==25664== by 0x196EC07D: ??? ==25664== by 0x14C964CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25664== by 0x10CCF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25664== by 0x10C68D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25664== by 0xF95FD38: PetscInitialize (pinit.c:924) ==25664== by 0xF4CBE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25664== by 0xF4CBEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25664== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25664== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25664== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25664== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25664== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25664== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==25664== ==25664== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25664== at 0x11086A9C: __open_nocancel (open64_nocancel.c:39) ==25664== by 0x1100ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25664== by 0xF508822: ??? ==25664== by 0xF50896F: ??? ==25664== by 0x14D3D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25664== by 0x14D3D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25664== by 0x14CF3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25664== by 0x14C962DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25664== by 0x10CCF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25664== by 0x10C68D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25664== by 0xF95FD38: PetscInitialize (pinit.c:924) ==25664== by 0xF4CBE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25664== by 0xF4CBEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25664== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25664== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25664== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25664== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25664== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25664== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==25664== ==25664== Open file descriptor 145: ==25664== ==25664== ==25664== Open file descriptor 142: ==25664== ==25664== ==25664== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==25664== ==25664== ==25664== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25664== ==25664== ==25664== ==25664== HEAP SUMMARY: ==25664== in use at exit: 35,126 bytes in 286 blocks ==25664== total heap usage: 7,390,839 allocs, 7,390,553 frees, 839,482,711 bytes allocated ==25664== ==25664== LEAK SUMMARY: ==25664== definitely lost: 0 bytes in 0 blocks ==25664== indirectly lost: 0 bytes in 0 blocks ==25664== possibly lost: 0 bytes in 0 blocks ==25664== still reachable: 56 bytes in 3 blocks ==25664== suppressed: 35,070 bytes in 283 blocks ==25664== Reachable blocks (those to which a pointer was found) are not shown. ==25664== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25664== ==25664== For lists of detected and suppressed errors, rerun with: -s ==25664== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)