==40477== Memcheck, a memory error detector ==40477== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40477== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40477== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulationBoundaryCondition -malloc_debug -malloc_dump -memory_info ==40477== Parent PID: 24203 ==40477== ==40477== ==40477== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40477== Open file descriptor 12: ==40477== at 0x125D80FD: pipe (pipe.c:29) ==40477== by 0x1B39D07D: ??? ==40477== by 0x164FD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40477== by 0x11EE0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40477== by 0x11E79D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40477== by 0x6277D38: PetscInitialize (pinit.c:924) ==40477== by 0x11DC356F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40477== by 0x11DC35BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40477== by 0x143521: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40477== by 0x13C4E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40477== by 0x13F2A4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40477== by 0x13F19F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40477== by 0x13F7B3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40477== by 0x13ACE5: main (TestCryptSimulationBoundaryCondition.cpp:18) ==40477== ==40477== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40477== at 0x125DCA9C: __open_nocancel (open64_nocancel.c:39) ==40477== by 0x12560BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40477== by 0x611C822: ??? ==40477== by 0x611C96F: ??? ==40477== by 0x165A26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40477== by 0x165A2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40477== by 0x16558922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40477== by 0x164FD2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40477== by 0x11EE0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40477== by 0x11E79D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40477== by 0x6277D38: PetscInitialize (pinit.c:924) ==40477== by 0x11DC356F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40477== by 0x11DC35BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40477== by 0x143521: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40477== by 0x13C4E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40477== by 0x13F2A4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40477== by 0x13F19F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40477== by 0x13F7B3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40477== by 0x13ACE5: main (TestCryptSimulationBoundaryCondition.cpp:18) ==40477== ==40477== Open file descriptor 145: ==40477== ==40477== ==40477== Open file descriptor 142: ==40477== ==40477== ==40477== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulationBoundaryCondition_valgrind.txt ==40477== ==40477== ==40477== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40477== ==40477== ==40477== ==40477== HEAP SUMMARY: ==40477== in use at exit: 35,311 bytes in 291 blocks ==40477== total heap usage: 54,427 allocs, 54,136 frees, 11,993,972 bytes allocated ==40477== ==40477== LEAK SUMMARY: ==40477== definitely lost: 0 bytes in 0 blocks ==40477== indirectly lost: 0 bytes in 0 blocks ==40477== possibly lost: 0 bytes in 0 blocks ==40477== still reachable: 136 bytes in 4 blocks ==40477== suppressed: 35,175 bytes in 287 blocks ==40477== Reachable blocks (those to which a pointer was found) are not shown. ==40477== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40477== ==40477== For lists of detected and suppressed errors, rerun with: -s ==40477== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)