==41108== Memcheck, a memory error detector ==41108== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41108== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41108== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOffLatticeCryptProjectionSimulation -malloc_debug -malloc_dump -memory_info ==41108== Parent PID: 24111 ==41108== ==41108== ==41108== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41108== Open file descriptor 12: ==41108== at 0x1267D0FD: pipe (pipe.c:29) ==41108== by 0x1B39D07D: ??? ==41108== by 0x164FD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41108== by 0x11E9E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41108== by 0x11E37D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41108== by 0x6210D38: PetscInitialize (pinit.c:924) ==41108== by 0x11D5DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41108== by 0x11D5DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41108== by 0x135AC5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41108== by 0x12F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41108== by 0x131D16: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41108== by 0x131BB6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41108== by 0x13224D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41108== by 0x12D735: main (TestOffLatticeCryptProjectionSimulation.cpp:19) ==41108== ==41108== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41108== at 0x12681A9C: __open_nocancel (open64_nocancel.c:39) ==41108== by 0x12605BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41108== by 0x11D95822: ??? ==41108== by 0x11D9596F: ??? ==41108== by 0x165A26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41108== by 0x165A2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41108== by 0x16558922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41108== by 0x164FD2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41108== by 0x11E9E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41108== by 0x11E37D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41108== by 0x6210D38: PetscInitialize (pinit.c:924) ==41108== by 0x11D5DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41108== by 0x11D5DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41108== by 0x135AC5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41108== by 0x12F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41108== by 0x131D16: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41108== by 0x131BB6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41108== by 0x13224D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41108== by 0x12D735: main (TestOffLatticeCryptProjectionSimulation.cpp:19) ==41108== ==41108== Open file descriptor 145: ==41108== ==41108== ==41108== Open file descriptor 142: ==41108== ==41108== ==41108== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeCryptProjectionSimulation_valgrind.txt ==41108== ==41108== ==41108== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41108== ==41108== ==41108== ==41108== HEAP SUMMARY: ==41108== in use at exit: 17,066 bytes in 73 blocks ==41108== total heap usage: 1,388,885 allocs, 1,388,812 frees, 123,286,581 bytes allocated ==41108== ==41108== LEAK SUMMARY: ==41108== definitely lost: 0 bytes in 0 blocks ==41108== indirectly lost: 0 bytes in 0 blocks ==41108== possibly lost: 0 bytes in 0 blocks ==41108== still reachable: 56 bytes in 3 blocks ==41108== suppressed: 17,010 bytes in 70 blocks ==41108== Reachable blocks (those to which a pointer was found) are not shown. ==41108== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41108== ==41108== For lists of detected and suppressed errors, rerun with: -s ==41108== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)