==40691== Memcheck, a memory error detector ==40691== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40691== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40691== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningImmersedBoundarySimulationsTutorial -malloc_debug -malloc_dump -memory_info ==40691== Parent PID: 24111 ==40691== ==40691== ==40691== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40691== Open file descriptor 12: ==40691== at 0x10CD60FD: pipe (pipe.c:29) ==40691== by 0x196DC07D: ??? ==40691== by 0x14C8A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40691== by 0x10923418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40691== by 0x108BCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40691== by 0xF5B3D38: PetscInitialize (pinit.c:924) ==40691== by 0xF11FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40691== by 0xF11FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40691== by 0x120CF3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40691== by 0x11C533: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40691== by 0x11E8AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40691== by 0x11E7A7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40691== by 0x11EDBB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40691== by 0x11AD35: main (TestRunningImmersedBoundarySimulationsTutorial.cpp:18) ==40691== ==40691== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40691== at 0x10CDAA9C: __open_nocancel (open64_nocancel.c:39) ==40691== by 0x10C5EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40691== by 0xF157822: ??? ==40691== by 0xF15796F: ??? ==40691== by 0x14D2F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40691== by 0x14D2F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40691== by 0x14CE5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40691== by 0x14C8A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40691== by 0x10923418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40691== by 0x108BCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40691== by 0xF5B3D38: PetscInitialize (pinit.c:924) ==40691== by 0xF11FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40691== by 0xF11FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40691== by 0x120CF3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40691== by 0x11C533: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40691== by 0x11E8AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40691== by 0x11E7A7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40691== by 0x11EDBB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40691== by 0x11AD35: main (TestRunningImmersedBoundarySimulationsTutorial.cpp:18) ==40691== ==40691== Open file descriptor 145: ==40691== ==40691== ==40691== Open file descriptor 142: ==40691== ==40691== ==40691== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningImmersedBoundarySimulationsTutorial_valgrind.txt ==40691== ==40691== ==40691== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40691== ==40691== ==40691== ==40691== HEAP SUMMARY: ==40691== in use at exit: 16,977 bytes in 69 blocks ==40691== total heap usage: 638,355 allocs, 638,286 frees, 180,690,295 bytes allocated ==40691== ==40691== LEAK SUMMARY: ==40691== definitely lost: 0 bytes in 0 blocks ==40691== indirectly lost: 0 bytes in 0 blocks ==40691== possibly lost: 0 bytes in 0 blocks ==40691== still reachable: 56 bytes in 3 blocks ==40691== suppressed: 16,921 bytes in 66 blocks ==40691== Reachable blocks (those to which a pointer was found) are not shown. ==40691== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40691== ==40691== For lists of detected and suppressed errors, rerun with: -s ==40691== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)