==27095== Memcheck, a memory error detector ==27095== Copyright (C) 2002-2024, and GNU GPL'd, by Julian Seward et al. ==27095== Using Valgrind-3.26.0 and LibVEX; rerun with -h for copyright info ==27095== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestGenericEventHandler -malloc_debug -malloc_dump -memory_info ==27095== Parent PID: 27020 ==27095== ==27095== ==27095== FILE DESCRIPTORS: 11 open (6 inherited) at exit. ==27095== Open file descriptor 10: /dev/shm/open_mpi.0000 ==27095== at 0x5182536: __open_nocancel (open64_nocancel.c:39) ==27095== by 0x5106BC3: shm_open@@GLIBC_2.34 (shm_open.c:46) ==27095== by 0x71AA89E: opal_shmem_posix_shm_open (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==27095== by 0x71AAA71: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==27095== by 0x71A9C38: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==27095== by 0x71A9F97: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==27095== by 0x7079159: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==27095== by 0x4A1B0E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x4A2049F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x4A212C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x4A1818F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x4A52627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x5B73446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4) ==27095== by 0x492FBE5: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27095== by 0x492FC33: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27095== by 0x400E84A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27095== by 0x400944D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27095== by 0x400C88A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27095== by 0x400C6B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27095== by 0x400CDFD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27095== by 0x4007812: main (TestGenericEventHandler.cpp:19) ==27095== { CoreError:FdNotClosed fun:__open_nocancel fun:shm_open@@GLIBC_2.34 fun:opal_shmem_posix_shm_open obj:/usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5 obj:/usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5 fun:opal_shmem_base_select fun:opal_init fun:ompi_rte_init obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7 fun:ompi_mpi_instance_init fun:ompi_mpi_init fun:PMPI_Init_thread fun:PetscInitialize fun:_ZN15PetscSetupUtils15InitialisePetscEv fun:_ZN15PetscSetupUtils11CommonSetupEv fun:_ZN10PetscSetup10setUpWorldEv fun:_ZN7CxxTest20RealWorldDescription5setUpEv fun:_ZN7CxxTest10TestRunner8runWorldEv fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE fun:_ZN7CxxTest14ErrorFormatter3runEv fun:main } ==27095== Open file descriptor 9: ==27095== at 0x519096B: eventfd (syscall-template.S:120) ==27095== by 0x720A188: evutil_eventfd_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==27095== by 0x7208395: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==27095== by 0x7208704: evthread_make_base_notifiable (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==27095== by 0x72089F1: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==27095== by 0x716F0D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==27095== by 0x716F1E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==27095== by 0x7079120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==27095== by 0x4A1B0E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x4A2049F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x4A212C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x4A1818F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x4A52627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x5B73446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4) ==27095== by 0x492FBE5: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27095== by 0x492FC33: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27095== by 0x400E84A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27095== by 0x400944D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27095== by 0x400C88A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27095== by 0x400C6B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27095== by 0x400CDFD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27095== by 0x4007812: main (TestGenericEventHandler.cpp:19) ==27095== { CoreError:FdNotClosed fun:eventfd fun:evutil_eventfd_ obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1 fun:evthread_make_base_notifiable fun:event_base_new_with_config fun:opal_event_base_create fun:opal_event_init fun:opal_init fun:ompi_rte_init obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7 fun:ompi_mpi_instance_init fun:ompi_mpi_init fun:PMPI_Init_thread fun:PetscInitialize fun:_ZN15PetscSetupUtils15InitialisePetscEv fun:_ZN15PetscSetupUtils11CommonSetupEv fun:_ZN10PetscSetup10setUpWorldEv fun:_ZN7CxxTest20RealWorldDescription5setUpEv fun:_ZN7CxxTest10TestRunner8runWorldEv fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE fun:_ZN7CxxTest14ErrorFormatter3runEv fun:main } ==27095== Open file descriptor 8: ==27095== at 0x51812BB: pipe2 (syscall-template.S:120) ==27095== by 0x7209F87: evutil_make_internal_pipe_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==27095== by 0x720C579: evsig_init_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==27095== by 0x720C774: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==27095== by 0x72088AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==27095== by 0x716F0D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==27095== by 0x716F1E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==27095== by 0x7079120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==27095== by 0x4A1B0E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x4A2049F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x4A212C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x4A1818F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x4A52627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x5B73446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4) ==27095== by 0x492FBE5: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27095== by 0x492FC33: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27095== by 0x400E84A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27095== by 0x400944D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27095== by 0x400C88A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27095== by 0x400C6B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27095== by 0x400CDFD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27095== by 0x4007812: main (TestGenericEventHandler.cpp:19) ==27095== { CoreError:FdNotClosed fun:pipe2 fun:evutil_make_internal_pipe_ fun:evsig_init_ obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1 fun:event_base_new_with_config fun:opal_event_base_create fun:opal_event_init fun:opal_init fun:ompi_rte_init obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7 fun:ompi_mpi_instance_init fun:ompi_mpi_init fun:PMPI_Init_thread fun:PetscInitialize fun:_ZN15PetscSetupUtils15InitialisePetscEv fun:_ZN15PetscSetupUtils11CommonSetupEv fun:_ZN10PetscSetup10setUpWorldEv fun:_ZN7CxxTest20RealWorldDescription5setUpEv fun:_ZN7CxxTest10TestRunner8runWorldEv fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE fun:_ZN7CxxTest14ErrorFormatter3runEv fun:main } ==27095== Open file descriptor 7: ==27095== at 0x51812BB: pipe2 (syscall-template.S:120) ==27095== by 0x7209F87: evutil_make_internal_pipe_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==27095== by 0x720C579: evsig_init_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==27095== by 0x720C774: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==27095== by 0x72088AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==27095== by 0x716F0D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==27095== by 0x716F1E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==27095== by 0x7079120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==27095== by 0x4A1B0E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x4A2049F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x4A212C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x4A1818F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x4A52627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x5B73446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4) ==27095== by 0x492FBE5: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27095== by 0x492FC33: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27095== by 0x400E84A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27095== by 0x400944D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27095== by 0x400C88A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27095== by 0x400C6B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27095== by 0x400CDFD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27095== by 0x4007812: main (TestGenericEventHandler.cpp:19) ==27095== { CoreError:FdNotClosed fun:pipe2 fun:evutil_make_internal_pipe_ fun:evsig_init_ obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1 fun:event_base_new_with_config fun:opal_event_base_create fun:opal_event_init fun:opal_init fun:ompi_rte_init obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7 fun:ompi_mpi_instance_init fun:ompi_mpi_init fun:PMPI_Init_thread fun:PetscInitialize fun:_ZN15PetscSetupUtils15InitialisePetscEv fun:_ZN15PetscSetupUtils11CommonSetupEv fun:_ZN10PetscSetup10setUpWorldEv fun:_ZN7CxxTest20RealWorldDescription5setUpEv fun:_ZN7CxxTest10TestRunner8runWorldEv fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE fun:_ZN7CxxTest14ErrorFormatter3runEv fun:main } ==27095== Open file descriptor 6: ==27095== at 0x519146B: epoll_create1 (syscall-template.S:120) ==27095== by 0x720C6FA: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==27095== by 0x72088AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==27095== by 0x716F0D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==27095== by 0x716F1E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==27095== by 0x7079120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==27095== by 0x4A1B0E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x4A2049F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x4A212C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x4A1818F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x4A52627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==27095== by 0x5B73446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4) ==27095== by 0x492FBE5: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27095== by 0x492FC33: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27095== by 0x400E84A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27095== by 0x400944D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27095== by 0x400C88A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27095== by 0x400C6B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27095== by 0x400CDFD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27095== by 0x4007812: main (TestGenericEventHandler.cpp:19) ==27095== { CoreError:FdNotClosed fun:epoll_create1 obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1 fun:event_base_new_with_config fun:opal_event_base_create fun:opal_event_init fun:opal_init fun:ompi_rte_init obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7 fun:ompi_mpi_instance_init fun:ompi_mpi_init fun:PMPI_Init_thread fun:PetscInitialize fun:_ZN15PetscSetupUtils15InitialisePetscEv fun:_ZN15PetscSetupUtils11CommonSetupEv fun:_ZN10PetscSetup10setUpWorldEv fun:_ZN7CxxTest20RealWorldDescription5setUpEv fun:_ZN7CxxTest10TestRunner8runWorldEv fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE fun:_ZN7CxxTest14ErrorFormatter3runEv fun:main } ==27095== ==27095== HEAP SUMMARY: ==27095== in use at exit: 99,425 bytes in 576 blocks ==27095== total heap usage: 24,554 allocs, 23,978 frees, 8,070,491 bytes allocated ==27095== ==27095== LEAK SUMMARY: ==27095== definitely lost: 0 bytes in 0 blocks ==27095== indirectly lost: 0 bytes in 0 blocks ==27095== possibly lost: 0 bytes in 0 blocks ==27095== still reachable: 10,073 bytes in 40 blocks ==27095== suppressed: 89,352 bytes in 536 blocks ==27095== Reachable blocks (those to which a pointer was found) are not shown. ==27095== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==27095== ==27095== For lists of detected and suppressed errors, rerun with: -s ==27095== ERROR SUMMARY: 5 errors from 5 contexts (suppressed: 33 from 33)