==42104== Memcheck, a memory error detector ==42104== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42104== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42104== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainTissue -malloc_debug -malloc_dump -memory_info ==42104== Parent PID: 24856 ==42104== ==42104== ==42104== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42104== Open file descriptor 12: ==42104== at 0xBCBC0BD: pipe (pipe.c:29) ==42104== by 0x1444907D: ??? ==42104== by 0xFC8B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42104== by 0xC08A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42104== by 0xC023D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42104== by 0x826CD38: PetscInitialize (pinit.c:924) ==42104== by 0xB5C3E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42104== by 0xB5C3EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42104== by 0x1397E0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42104== by 0x133F03: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42104== by 0x136652: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42104== by 0x13654E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42104== by 0x136B61: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42104== by 0x132705: main (TestBidomainTissue.cpp:18) ==42104== ==42104== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42104== at 0xBCC0A5C: __open_nocancel (open64_nocancel.c:39) ==42104== by 0xBC44B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42104== by 0x8111822: ??? ==42104== by 0x811196F: ??? ==42104== by 0xFD306DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42104== by 0xFD30938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42104== by 0xFCE6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42104== by 0xFC8B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42104== by 0xC08A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42104== by 0xC023D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42104== by 0x826CD38: PetscInitialize (pinit.c:924) ==42104== by 0xB5C3E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42104== by 0xB5C3EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42104== by 0x1397E0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42104== by 0x133F03: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42104== by 0x136652: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42104== by 0x13654E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42104== by 0x136B61: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42104== by 0x132705: main (TestBidomainTissue.cpp:18) ==42104== ==42104== Open file descriptor 145: ==42104== ==42104== ==42104== Open file descriptor 142: ==42104== ==42104== ==42104== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainTissue_valgrind.txt ==42104== ==42104== ==42104== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42104== ==42104== ==42104== ==42104== HEAP SUMMARY: ==42104== in use at exit: 35,199 bytes in 289 blocks ==42104== total heap usage: 175,892 allocs, 175,603 frees, 49,981,357 bytes allocated ==42104== ==42104== LEAK SUMMARY: ==42104== definitely lost: 0 bytes in 0 blocks ==42104== indirectly lost: 0 bytes in 0 blocks ==42104== possibly lost: 0 bytes in 0 blocks ==42104== still reachable: 24 bytes in 2 blocks ==42104== suppressed: 35,175 bytes in 287 blocks ==42104== Reachable blocks (those to which a pointer was found) are not shown. ==42104== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42104== ==42104== For lists of detected and suppressed errors, rerun with: -s ==42104== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)