==42112== Memcheck, a memory error detector ==42112== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42112== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42112== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainWithBathProblem -malloc_debug -malloc_dump -memory_info ==42112== Parent PID: 24856 ==42112== ==42112== ==42112== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42112== Open file descriptor 12: ==42112== at 0xAD800BD: pipe (pipe.c:29) ==42112== by 0x1444A07D: ??? ==42112== by 0xDA8B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42112== by 0xB14E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42112== by 0xB0E7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42112== by 0xB629D38: PetscInitialize (pinit.c:924) ==42112== by 0xA57DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42112== by 0xA57DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42112== by 0x14218A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42112== by 0x13BB8D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42112== by 0x13F14C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42112== by 0x13EFEC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42112== by 0x13F683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42112== by 0x139E15: main (TestBidomainWithBathProblem.cpp:19) ==42112== ==42112== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42112== at 0xAD84A5C: __open_nocancel (open64_nocancel.c:39) ==42112== by 0xAD08B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42112== by 0xA5B5822: ??? ==42112== by 0xA5B596F: ??? ==42112== by 0xDB306DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42112== by 0xDB30938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42112== by 0xDAE6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42112== by 0xDA8B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42112== by 0xB14E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42112== by 0xB0E7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42112== by 0xB629D38: PetscInitialize (pinit.c:924) ==42112== by 0xA57DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42112== by 0xA57DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42112== by 0x14218A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42112== by 0x13BB8D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42112== by 0x13F14C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42112== by 0x13EFEC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42112== by 0x13F683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42112== by 0x139E15: main (TestBidomainWithBathProblem.cpp:19) ==42112== ==42112== Open file descriptor 145: ==42112== ==42112== ==42112== Open file descriptor 142: ==42112== ==42112== ==42112== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainWithBathProblem_valgrind.txt ==42112== ==42112== ==42112== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42112== ==42112== ==42112== ==42112== HEAP SUMMARY: ==42112== in use at exit: 35,606 bytes in 295 blocks ==42112== total heap usage: 1,378,113 allocs, 1,377,818 frees, 656,488,074 bytes allocated ==42112== ==42112== LEAK SUMMARY: ==42112== definitely lost: 0 bytes in 0 blocks ==42112== indirectly lost: 0 bytes in 0 blocks ==42112== possibly lost: 0 bytes in 0 blocks ==42112== still reachable: 24 bytes in 2 blocks ==42112== suppressed: 35,582 bytes in 293 blocks ==42112== Reachable blocks (those to which a pointer was found) are not shown. ==42112== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42112== ==42112== For lists of detected and suppressed errors, rerun with: -s ==42112== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 66 from 31)