==44419== Memcheck, a memory error detector ==44419== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==44419== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==44419== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHdf5ToVisualizerConverters -malloc_debug -malloc_dump -memory_info ==44419== Parent PID: 24856 ==44419== ==44419== ==44419== FILE DESCRIPTORS: 9 open (3 std) at exit. ==44419== Open file descriptor 12: ==44419== at 0xA9C70BD: pipe (pipe.c:29) ==44419== by 0x1444A07D: ??? ==44419== by 0xDA8B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==44419== by 0xAD93418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44419== by 0xAD2CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44419== by 0xB270D38: PetscInitialize (pinit.c:924) ==44419== by 0xA2ABE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==44419== by 0xA2ABEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==44419== by 0x1241F8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==44419== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==44419== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==44419== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==44419== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==44419== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==44419== ==44419== Open file descriptor 8: /dev/shm/open_mpi.0000 ==44419== at 0xA9CBA5C: __open_nocancel (open64_nocancel.c:39) ==44419== by 0xA94FB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==44419== by 0xA2E3822: ??? ==44419== by 0xA2E396F: ??? ==44419== by 0xDB306DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==44419== by 0xDB30938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==44419== by 0xDAE6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==44419== by 0xDA8B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==44419== by 0xAD93418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44419== by 0xAD2CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44419== by 0xB270D38: PetscInitialize (pinit.c:924) ==44419== by 0xA2ABE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==44419== by 0xA2ABEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==44419== by 0x1241F8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==44419== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==44419== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==44419== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==44419== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==44419== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==44419== ==44419== Open file descriptor 145: ==44419== ==44419== ==44419== Open file descriptor 142: ==44419== ==44419== ==44419== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5ToVisualizerConverters_valgrind.txt ==44419== ==44419== ==44419== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==44419== ==44419== ==44419== ==44419== HEAP SUMMARY: ==44419== in use at exit: 35,199 bytes in 289 blocks ==44419== total heap usage: 104,107 allocs, 103,818 frees, 35,116,171 bytes allocated ==44419== ==44419== LEAK SUMMARY: ==44419== definitely lost: 0 bytes in 0 blocks ==44419== indirectly lost: 0 bytes in 0 blocks ==44419== possibly lost: 0 bytes in 0 blocks ==44419== still reachable: 24 bytes in 2 blocks ==44419== suppressed: 35,175 bytes in 287 blocks ==44419== Reachable blocks (those to which a pointer was found) are not shown. ==44419== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==44419== ==44419== For lists of detected and suppressed errors, rerun with: -s ==44419== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)