==25371== Memcheck, a memory error detector ==25371== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25371== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25371== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestHoneycombMeshGenerator -malloc_debug -malloc_dump -memory_info ==25371== Parent PID: 24856 ==25371== ==25371== ==25371== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25371== Open file descriptor 12: ==25371== at 0x82F50BD: pipe (pipe.c:29) ==25371== by 0x101D307D: ??? ==25371== by 0xBB524CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25371== by 0x7E5D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25371== by 0x7DF6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25371== by 0x6AEDD38: PetscInitialize (pinit.c:924) ==25371== by 0x6657E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25371== by 0x6657EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25371== by 0x11D935: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25371== by 0x1187CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25371== by 0x11B508: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25371== by 0x11B3A8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25371== by 0x11BA3F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25371== by 0x116BF5: main (TestHoneycombMeshGenerator.cpp:19) ==25371== ==25371== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25371== at 0x82F9A5C: __open_nocancel (open64_nocancel.c:39) ==25371== by 0x827DB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25371== by 0x668F822: ??? ==25371== by 0x668F96F: ??? ==25371== by 0xBBF76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25371== by 0xBBF7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25371== by 0xBBAD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25371== by 0xBB522DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25371== by 0x7E5D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25371== by 0x7DF6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25371== by 0x6AEDD38: PetscInitialize (pinit.c:924) ==25371== by 0x6657E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25371== by 0x6657EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25371== by 0x11D935: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25371== by 0x1187CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25371== by 0x11B508: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25371== by 0x11B3A8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25371== by 0x11BA3F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25371== by 0x116BF5: main (TestHoneycombMeshGenerator.cpp:19) ==25371== ==25371== Open file descriptor 145: ==25371== ==25371== ==25371== Open file descriptor 142: ==25371== ==25371== ==25371== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHoneycombMeshGenerator_valgrind.txt ==25371== ==25371== ==25371== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25371== ==25371== ==25371== ==25371== HEAP SUMMARY: ==25371== in use at exit: 37,639 bytes in 290 blocks ==25371== total heap usage: 1,184,380 allocs, 1,184,090 frees, 47,914,571 bytes allocated ==25371== ==25371== LEAK SUMMARY: ==25371== definitely lost: 0 bytes in 0 blocks ==25371== indirectly lost: 0 bytes in 0 blocks ==25371== possibly lost: 0 bytes in 0 blocks ==25371== still reachable: 2,576 bytes in 3 blocks ==25371== suppressed: 35,063 bytes in 287 blocks ==25371== Reachable blocks (those to which a pointer was found) are not shown. ==25371== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25371== ==25371== For lists of detected and suppressed errors, rerun with: -s ==25371== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)