==42049== Memcheck, a memory error detector ==42049== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42049== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42049== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestMatrixVentilationProblem -malloc_debug -malloc_dump -memory_info ==42049== Parent PID: 24856 ==42049== ==42049== ==42049== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42049== Open file descriptor 12: ==42049== at 0x82DC0BD: pipe (pipe.c:29) ==42049== by 0x108B007D: ??? ==42049== by 0xBE794CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42049== by 0x84D7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42049== by 0x8470D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42049== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==42049== by 0x7AF3E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42049== by 0x7AF3EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42049== by 0x117742: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42049== by 0x1128B9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42049== by 0x1155E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42049== by 0x115486: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42049== by 0x115B1D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42049== by 0x110B35: main (TestMatrixVentilationProblem.cpp:19) ==42049== ==42049== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42049== at 0x82E0A5C: __open_nocancel (open64_nocancel.c:39) ==42049== by 0x8264B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42049== by 0x7B2B822: ??? ==42049== by 0x7B2B96F: ??? ==42049== by 0xBF1E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42049== by 0xBF1E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42049== by 0xBED4922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42049== by 0xBE792DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42049== by 0x84D7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42049== by 0x8470D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42049== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==42049== by 0x7AF3E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42049== by 0x7AF3EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42049== by 0x117742: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42049== by 0x1128B9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42049== by 0x1155E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42049== by 0x115486: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42049== by 0x115B1D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42049== by 0x110B35: main (TestMatrixVentilationProblem.cpp:19) ==42049== ==42049== Open file descriptor 145: ==42049== ==42049== ==42049== Open file descriptor 142: ==42049== ==42049== ==42049== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMatrixVentilationProblem_valgrind.txt ==42049== ==42049== ==42049== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42049== ==42049== ==42049== ==42049== HEAP SUMMARY: ==42049== in use at exit: 35,183 bytes in 289 blocks ==42049== total heap usage: 121,283 allocs, 120,994 frees, 184,118,012 bytes allocated ==42049== ==42049== LEAK SUMMARY: ==42049== definitely lost: 0 bytes in 0 blocks ==42049== indirectly lost: 0 bytes in 0 blocks ==42049== possibly lost: 0 bytes in 0 blocks ==42049== still reachable: 24 bytes in 2 blocks ==42049== suppressed: 35,159 bytes in 287 blocks ==42049== Reachable blocks (those to which a pointer was found) are not shown. ==42049== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42049== ==42049== For lists of detected and suppressed errors, rerun with: -s ==42049== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)