==26899== Memcheck, a memory error detector ==26899== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26899== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26899== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26899== Parent PID: 24856 ==26899== ==26899== ==26899== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26899== Open file descriptor 12: ==26899== at 0x103080BD: pipe (pipe.c:29) ==26899== by 0x1A49C07D: ??? ==26899== by 0x134F74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26899== by 0x10C01418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26899== by 0x10B9AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26899== by 0x10D46D38: PetscInitialize (pinit.c:924) ==26899== by 0xFADDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26899== by 0xFADDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26899== by 0x30ECC0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26899== by 0x305679: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26899== by 0x30A0AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26899== by 0x309F4C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26899== by 0x30A5E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26899== by 0x303A95: main (TestMeshBasedCellPopulation.cpp:19) ==26899== ==26899== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26899== at 0x1030CA5C: __open_nocancel (open64_nocancel.c:39) ==26899== by 0x10290B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26899== by 0xFB15822: ??? ==26899== by 0xFB1596F: ??? ==26899== by 0x1359C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26899== by 0x1359C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26899== by 0x13552922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26899== by 0x134F72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26899== by 0x10C01418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26899== by 0x10B9AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26899== by 0x10D46D38: PetscInitialize (pinit.c:924) ==26899== by 0xFADDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26899== by 0xFADDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26899== by 0x30ECC0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26899== by 0x305679: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26899== by 0x30A0AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26899== by 0x309F4C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26899== by 0x30A5E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26899== by 0x303A95: main (TestMeshBasedCellPopulation.cpp:19) ==26899== ==26899== Open file descriptor 145: ==26899== ==26899== ==26899== Open file descriptor 142: ==26899== ==26899== ==26899== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulation_valgrind.txt ==26899== ==26899== ==26899== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26899== ==26899== ==26899== ==26899== HEAP SUMMARY: ==26899== in use at exit: 35,215 bytes in 290 blocks ==26899== total heap usage: 132,093 allocs, 131,803 frees, 35,902,822 bytes allocated ==26899== ==26899== LEAK SUMMARY: ==26899== definitely lost: 0 bytes in 0 blocks ==26899== indirectly lost: 0 bytes in 0 blocks ==26899== possibly lost: 0 bytes in 0 blocks ==26899== still reachable: 56 bytes in 3 blocks ==26899== suppressed: 35,159 bytes in 287 blocks ==26899== Reachable blocks (those to which a pointer was found) are not shown. ==26899== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26899== ==26899== For lists of detected and suppressed errors, rerun with: -s ==26899== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)