==25564== Memcheck, a memory error detector ==25564== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25564== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25564== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestMutableVertexMeshReMesh -malloc_debug -malloc_dump -memory_info ==25564== Parent PID: 24856 ==25564== ==25564== ==25564== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25564== Open file descriptor 12: ==25564== at 0x82500BD: pipe (pipe.c:29) ==25564== by 0x101D107D: ??? ==25564== by 0xBB524CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25564== by 0x7E9F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25564== by 0x7E38D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25564== by 0x6B2FD38: PetscInitialize (pinit.c:924) ==25564== by 0x6657E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25564== by 0x6657EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25564== by 0x1B0ADD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25564== by 0x1A87FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25564== by 0x1AC684: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25564== by 0x1AC524: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25564== by 0x1ACBBB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25564== by 0x1A6C25: main (TestMutableVertexMeshReMesh.cpp:19) ==25564== ==25564== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25564== at 0x8254A5C: __open_nocancel (open64_nocancel.c:39) ==25564== by 0x81D8B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25564== by 0x668F822: ??? ==25564== by 0x668F96F: ??? ==25564== by 0xBBF76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25564== by 0xBBF7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25564== by 0xBBAD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25564== by 0xBB522DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25564== by 0x7E9F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25564== by 0x7E38D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25564== by 0x6B2FD38: PetscInitialize (pinit.c:924) ==25564== by 0x6657E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25564== by 0x6657EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25564== by 0x1B0ADD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25564== by 0x1A87FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25564== by 0x1AC684: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25564== by 0x1AC524: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25564== by 0x1ACBBB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25564== by 0x1A6C25: main (TestMutableVertexMeshReMesh.cpp:19) ==25564== ==25564== Open file descriptor 145: ==25564== ==25564== ==25564== Open file descriptor 142: ==25564== ==25564== ==25564== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMutableVertexMeshReMesh_valgrind.txt ==25564== ==25564== ==25564== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25564== ==25564== ==25564== ==25564== HEAP SUMMARY: ==25564== in use at exit: 37,639 bytes in 290 blocks ==25564== total heap usage: 65,542 allocs, 65,252 frees, 8,965,846 bytes allocated ==25564== ==25564== LEAK SUMMARY: ==25564== definitely lost: 0 bytes in 0 blocks ==25564== indirectly lost: 0 bytes in 0 blocks ==25564== possibly lost: 0 bytes in 0 blocks ==25564== still reachable: 2,576 bytes in 3 blocks ==25564== suppressed: 35,063 bytes in 287 blocks ==25564== Reachable blocks (those to which a pointer was found) are not shown. ==25564== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25564== ==25564== For lists of detected and suppressed errors, rerun with: -s ==25564== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)