==26931== Memcheck, a memory error detector ==26931== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26931== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26931== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==26931== Parent PID: 24856 ==26931== ==26931== ==26931== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26931== Open file descriptor 12: ==26931== at 0x102C40BD: pipe (pipe.c:29) ==26931== by 0x1A49C07D: ??? ==26931== by 0x134F74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26931== by 0x10BBF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26931== by 0x10B58D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26931== by 0x10D46D38: PetscInitialize (pinit.c:924) ==26931== by 0xFADDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26931== by 0xFADDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26931== by 0x13C3D2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26931== by 0x13524D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26931== by 0x137F0A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26931== by 0x137DAA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26931== by 0x138441: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26931== by 0x133675: main (TestNodeBasedCellPopulationParallelMethods.cpp:19) ==26931== ==26931== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26931== at 0x102C8A5C: __open_nocancel (open64_nocancel.c:39) ==26931== by 0x1024CB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26931== by 0xFB15822: ??? ==26931== by 0xFB1596F: ??? ==26931== by 0x1359C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26931== by 0x1359C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26931== by 0x13552922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26931== by 0x134F72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26931== by 0x10BBF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26931== by 0x10B58D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26931== by 0x10D46D38: PetscInitialize (pinit.c:924) ==26931== by 0xFADDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26931== by 0xFADDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26931== by 0x13C3D2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26931== by 0x13524D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26931== by 0x137F0A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26931== by 0x137DAA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26931== by 0x138441: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26931== by 0x133675: main (TestNodeBasedCellPopulationParallelMethods.cpp:19) ==26931== ==26931== Open file descriptor 145: ==26931== ==26931== ==26931== Open file descriptor 142: ==26931== ==26931== ==26931== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationParallelMethods_valgrind.txt ==26931== ==26931== ==26931== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26931== ==26931== ==26931== ==26931== HEAP SUMMARY: ==26931== in use at exit: 35,215 bytes in 290 blocks ==26931== total heap usage: 49,330 allocs, 49,040 frees, 11,622,110 bytes allocated ==26931== ==26931== LEAK SUMMARY: ==26931== definitely lost: 0 bytes in 0 blocks ==26931== indirectly lost: 0 bytes in 0 blocks ==26931== possibly lost: 0 bytes in 0 blocks ==26931== still reachable: 56 bytes in 3 blocks ==26931== suppressed: 35,159 bytes in 287 blocks ==26931== Reachable blocks (those to which a pointer was found) are not shown. ==26931== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26931== ==26931== For lists of detected and suppressed errors, rerun with: -s ==26931== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)