==26922== Memcheck, a memory error detector ==26922== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26922== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26922== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26922== Parent PID: 24856 ==26922== ==26922== ==26922== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26922== Open file descriptor 12: ==26922== at 0x102B00BD: pipe (pipe.c:29) ==26922== by 0x1A49C07D: ??? ==26922== by 0x134F74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26922== by 0x10B1A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26922== by 0x10AB3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26922== by 0x10C5FD38: PetscInitialize (pinit.c:924) ==26922== by 0xFB6CE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26922== by 0xFB6CEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26922== by 0x2FF5B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26922== by 0x2F60D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26922== by 0x2FAA32: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26922== by 0x2FA8D2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26922== by 0x2FAF69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26922== by 0x2F44F5: main (TestNodeBasedCellPopulation.cpp:19) ==26922== ==26922== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26922== at 0x102B4A5C: __open_nocancel (open64_nocancel.c:39) ==26922== by 0x10238B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26922== by 0xFBA4822: ??? ==26922== by 0xFBA496F: ??? ==26922== by 0x1359C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26922== by 0x1359C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26922== by 0x13552922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26922== by 0x134F72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26922== by 0x10B1A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26922== by 0x10AB3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26922== by 0x10C5FD38: PetscInitialize (pinit.c:924) ==26922== by 0xFB6CE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26922== by 0xFB6CEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26922== by 0x2FF5B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26922== by 0x2F60D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26922== by 0x2FAA32: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26922== by 0x2FA8D2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26922== by 0x2FAF69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26922== by 0x2F44F5: main (TestNodeBasedCellPopulation.cpp:19) ==26922== ==26922== Open file descriptor 145: ==26922== ==26922== ==26922== Open file descriptor 142: ==26922== ==26922== ==26922== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==26922== ==26922== ==26922== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26922== ==26922== ==26922== ==26922== HEAP SUMMARY: ==26922== in use at exit: 35,142 bytes in 286 blocks ==26922== total heap usage: 30,274,847 allocs, 30,274,561 frees, 1,833,715,045 bytes allocated ==26922== ==26922== LEAK SUMMARY: ==26922== definitely lost: 0 bytes in 0 blocks ==26922== indirectly lost: 0 bytes in 0 blocks ==26922== possibly lost: 0 bytes in 0 blocks ==26922== still reachable: 56 bytes in 3 blocks ==26922== suppressed: 35,086 bytes in 283 blocks ==26922== Reachable blocks (those to which a pointer was found) are not shown. ==26922== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26922== ==26922== For lists of detected and suppressed errors, rerun with: -s ==26922== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)